Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SH3RF2Q8TEC5 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SH3RF2Q8TEC5 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SH3RF2Q8TEC5 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.58■□□□□ 0.89
SH3RF2Q8TEC5 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SH3RF2Q8TEC5 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SH3RF2Q8TEC5 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.58■□□□□ 0.89
SH3RF2Q8TEC5 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.58■□□□□ 0.89
SH3RF2Q8TEC5 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.58■□□□□ 0.89
SH3RF2Q8TEC5 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
SH3RF2Q8TEC5 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SH3RF2Q8TEC5 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
SH3RF2Q8TEC5 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SH3RF2Q8TEC5 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.58■□□□□ 0.89
SH3RF2Q8TEC5 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
SH3RF2Q8TEC5 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.58■□□□□ 0.89
SH3RF2Q8TEC5 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.58■□□□□ 0.89
SH3RF2Q8TEC5 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.58■□□□□ 0.89
SH3RF2Q8TEC5 AC073195.1-201ENST00000607241 877 ntBASIC20.58■□□□□ 0.89
SH3RF2Q8TEC5 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.58■□□□□ 0.89
SH3RF2Q8TEC5 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
SH3RF2Q8TEC5 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SH3RF2Q8TEC5 AC092667.1-201ENST00000434301 2586 ntBASIC20.58■□□□□ 0.88
SH3RF2Q8TEC5 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
SH3RF2Q8TEC5 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SH3RF2Q8TEC5 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SH3RF2Q8TEC5 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SH3RF2Q8TEC5 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.57■□□□□ 0.88
SH3RF2Q8TEC5 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SH3RF2Q8TEC5 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SH3RF2Q8TEC5 AC073130.3-201ENST00000624389 2278 ntBASIC20.57■□□□□ 0.88
SH3RF2Q8TEC5 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.57■□□□□ 0.88
SH3RF2Q8TEC5 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SH3RF2Q8TEC5 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.57■□□□□ 0.88
SH3RF2Q8TEC5 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.57■□□□□ 0.88
SH3RF2Q8TEC5 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.57■□□□□ 0.88
SH3RF2Q8TEC5 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SH3RF2Q8TEC5 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
SH3RF2Q8TEC5 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.57■□□□□ 0.88
SH3RF2Q8TEC5 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SH3RF2Q8TEC5 AL355355.2-201ENST00000442321 338 ntBASIC20.57■□□□□ 0.88
SH3RF2Q8TEC5 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.57■□□□□ 0.88
SH3RF2Q8TEC5 AP002982.1-201ENST00000492365 877 ntBASIC20.57■□□□□ 0.88
SH3RF2Q8TEC5 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.57■□□□□ 0.88
SH3RF2Q8TEC5 AP003071.4-201ENST00000562276 1284 ntBASIC20.57■□□□□ 0.88
SH3RF2Q8TEC5 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.57■□□□□ 0.88
SH3RF2Q8TEC5 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.57■□□□□ 0.88
SH3RF2Q8TEC5 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.57■□□□□ 0.88
SH3RF2Q8TEC5 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.57■□□□□ 0.88
SH3RF2Q8TEC5 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SH3RF2Q8TEC5 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SH3RF2Q8TEC5 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SH3RF2Q8TEC5 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SH3RF2Q8TEC5 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SH3RF2Q8TEC5 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SH3RF2Q8TEC5 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SH3RF2Q8TEC5 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SH3RF2Q8TEC5 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SH3RF2Q8TEC5 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SH3RF2Q8TEC5 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
SH3RF2Q8TEC5 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
SH3RF2Q8TEC5 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.56■□□□□ 0.88
SH3RF2Q8TEC5 LINC01023-201ENST00000606054 436 ntBASIC20.56■□□□□ 0.88
SH3RF2Q8TEC5 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.56■□□□□ 0.88
SH3RF2Q8TEC5 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SH3RF2Q8TEC5 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SH3RF2Q8TEC5 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.56■□□□□ 0.88
SH3RF2Q8TEC5 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SH3RF2Q8TEC5 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SH3RF2Q8TEC5 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
SH3RF2Q8TEC5 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.56■□□□□ 0.88
SH3RF2Q8TEC5 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.56■□□□□ 0.88
SH3RF2Q8TEC5 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SH3RF2Q8TEC5 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SH3RF2Q8TEC5 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.55■□□□□ 0.88
SH3RF2Q8TEC5 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
SH3RF2Q8TEC5 LINC01006-201ENST00000333319 2292 ntBASIC20.55■□□□□ 0.88
SH3RF2Q8TEC5 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SH3RF2Q8TEC5 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SH3RF2Q8TEC5 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.55■□□□□ 0.88
SH3RF2Q8TEC5 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.55■□□□□ 0.88
SH3RF2Q8TEC5 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
SH3RF2Q8TEC5 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.55■□□□□ 0.88
SH3RF2Q8TEC5 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.55■□□□□ 0.88
SH3RF2Q8TEC5 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SH3RF2Q8TEC5 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SH3RF2Q8TEC5 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SH3RF2Q8TEC5 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SH3RF2Q8TEC5 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SH3RF2Q8TEC5 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.54■□□□□ 0.88
SH3RF2Q8TEC5 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.54■□□□□ 0.88
SH3RF2Q8TEC5 KRT16P6-202ENST00000425692 1426 ntBASIC20.54■□□□□ 0.88
SH3RF2Q8TEC5 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.54■□□□□ 0.88
SH3RF2Q8TEC5 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
SH3RF2Q8TEC5 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH3RF2Q8TEC5 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH3RF2Q8TEC5 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH3RF2Q8TEC5 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH3RF2Q8TEC5 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SH3RF2Q8TEC5 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms