Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDND2Q8NHS1 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC16.82■□□□□ 0.28
CLDND2Q8NHS1 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDND2Q8NHS1 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CLDND2Q8NHS1 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC16.82■□□□□ 0.28
CLDND2Q8NHS1 AC121338.2-201ENST00000622535 1744 ntBASIC16.82■□□□□ 0.28
CLDND2Q8NHS1 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDND2Q8NHS1 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDND2Q8NHS1 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CLDND2Q8NHS1 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDND2Q8NHS1 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDND2Q8NHS1 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLDND2Q8NHS1 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.82■□□□□ 0.28
CLDND2Q8NHS1 KRT8P36-201ENST00000489121 1440 ntBASIC16.82■□□□□ 0.28
CLDND2Q8NHS1 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLDND2Q8NHS1 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC16.82■□□□□ 0.28
CLDND2Q8NHS1 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDND2Q8NHS1 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CLDND2Q8NHS1 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
CLDND2Q8NHS1 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC16.82■□□□□ 0.28
CLDND2Q8NHS1 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.82■□□□□ 0.28
CLDND2Q8NHS1 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLDND2Q8NHS1 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLDND2Q8NHS1 LY6E-205ENST00000519611 635 ntTSL 3 BASIC16.82■□□□□ 0.28
CLDND2Q8NHS1 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
CLDND2Q8NHS1 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC16.82■□□□□ 0.28
CLDND2Q8NHS1 AL023875.1-201ENST00000640777 796 ntBASIC16.82■□□□□ 0.28
CLDND2Q8NHS1 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLDND2Q8NHS1 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDND2Q8NHS1 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDND2Q8NHS1 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC16.82■□□□□ 0.28
CLDND2Q8NHS1 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CLDND2Q8NHS1 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLDND2Q8NHS1 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDND2Q8NHS1 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CLDND2Q8NHS1 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDND2Q8NHS1 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC16.81■□□□□ 0.28
CLDND2Q8NHS1 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDND2Q8NHS1 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
CLDND2Q8NHS1 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC16.81■□□□□ 0.28
CLDND2Q8NHS1 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDND2Q8NHS1 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC16.81■□□□□ 0.28
CLDND2Q8NHS1 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLDND2Q8NHS1 AC239809.2-201ENST00000415381 517 ntBASIC16.81■□□□□ 0.28
CLDND2Q8NHS1 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLDND2Q8NHS1 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC16.81■□□□□ 0.28
CLDND2Q8NHS1 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
CLDND2Q8NHS1 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.81■□□□□ 0.28
CLDND2Q8NHS1 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.81■□□□□ 0.28
CLDND2Q8NHS1 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.81■□□□□ 0.28
CLDND2Q8NHS1 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.81■□□□□ 0.28
CLDND2Q8NHS1 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CLDND2Q8NHS1 AC087289.5-201ENST00000586076 3175 ntBASIC16.81■□□□□ 0.28
CLDND2Q8NHS1 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLDND2Q8NHS1 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDND2Q8NHS1 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDND2Q8NHS1 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLDND2Q8NHS1 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLDND2Q8NHS1 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CLDND2Q8NHS1 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDND2Q8NHS1 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLDND2Q8NHS1 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDND2Q8NHS1 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC16.8■□□□□ 0.28
CLDND2Q8NHS1 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.8■□□□□ 0.28
CLDND2Q8NHS1 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC16.8■□□□□ 0.28
CLDND2Q8NHS1 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLDND2Q8NHS1 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CLDND2Q8NHS1 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDND2Q8NHS1 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLDND2Q8NHS1 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.8■□□□□ 0.28
CLDND2Q8NHS1 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLDND2Q8NHS1 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDND2Q8NHS1 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC16.8■□□□□ 0.28
CLDND2Q8NHS1 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDND2Q8NHS1 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC16.8■□□□□ 0.28
CLDND2Q8NHS1 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC16.8■□□□□ 0.28
CLDND2Q8NHS1 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.8■□□□□ 0.28
CLDND2Q8NHS1 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.8■□□□□ 0.28
CLDND2Q8NHS1 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.8■□□□□ 0.28
CLDND2Q8NHS1 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.8■□□□□ 0.28
CLDND2Q8NHS1 Z99916.2-201ENST00000604037 246 ntBASIC16.8■□□□□ 0.28
CLDND2Q8NHS1 AC124016.1-201ENST00000609552 612 ntBASIC16.8■□□□□ 0.28
CLDND2Q8NHS1 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDND2Q8NHS1 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDND2Q8NHS1 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDND2Q8NHS1 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC16.8■□□□□ 0.28
CLDND2Q8NHS1 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDND2Q8NHS1 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDND2Q8NHS1 AP005212.1-201ENST00000581547 1997 ntBASIC16.8■□□□□ 0.28
CLDND2Q8NHS1 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLDND2Q8NHS1 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLDND2Q8NHS1 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CLDND2Q8NHS1 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDND2Q8NHS1 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDND2Q8NHS1 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
CLDND2Q8NHS1 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDND2Q8NHS1 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDND2Q8NHS1 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLDND2Q8NHS1 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDND2Q8NHS1 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms