Protein–RNA interactions for Protein: Q8NBS3

SLC4A11, Sodium bicarbonate transporter-like protein 11, humanhuman

Predictions only

Length 891 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A11Q8NBS3 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC4A11Q8NBS3 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC4A11Q8NBS3 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC4A11Q8NBS3 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SLC4A11Q8NBS3 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.04■□□□□ 0.96
SLC4A11Q8NBS3 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC4A11Q8NBS3 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC4A11Q8NBS3 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SLC4A11Q8NBS3 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
SLC4A11Q8NBS3 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.03■□□□□ 0.96
SLC4A11Q8NBS3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC4A11Q8NBS3 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC4A11Q8NBS3 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.03■□□□□ 0.96
SLC4A11Q8NBS3 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC4A11Q8NBS3 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC4A11Q8NBS3 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC4A11Q8NBS3 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
SLC4A11Q8NBS3 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.03■□□□□ 0.96
SLC4A11Q8NBS3 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.03■□□□□ 0.96
SLC4A11Q8NBS3 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.03■□□□□ 0.96
SLC4A11Q8NBS3 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
SLC4A11Q8NBS3 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC4A11Q8NBS3 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SLC4A11Q8NBS3 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.02■□□□□ 0.96
SLC4A11Q8NBS3 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.02■□□□□ 0.96
SLC4A11Q8NBS3 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SLC4A11Q8NBS3 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC4A11Q8NBS3 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.02■□□□□ 0.96
SLC4A11Q8NBS3 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC4A11Q8NBS3 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SLC4A11Q8NBS3 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC4A11Q8NBS3 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SLC4A11Q8NBS3 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SLC4A11Q8NBS3 ITM2C-210ENST00000620962 501 ntBASIC21.02■□□□□ 0.96
SLC4A11Q8NBS3 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.02■□□□□ 0.96
SLC4A11Q8NBS3 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SLC4A11Q8NBS3 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SLC4A11Q8NBS3 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SLC4A11Q8NBS3 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.02■□□□□ 0.96
SLC4A11Q8NBS3 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.02■□□□□ 0.96
SLC4A11Q8NBS3 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC4A11Q8NBS3 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
SLC4A11Q8NBS3 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
SLC4A11Q8NBS3 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SLC4A11Q8NBS3 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC4A11Q8NBS3 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.01■□□□□ 0.95
SLC4A11Q8NBS3 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.01■□□□□ 0.95
SLC4A11Q8NBS3 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC4A11Q8NBS3 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC4A11Q8NBS3 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC4A11Q8NBS3 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC4A11Q8NBS3 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.01■□□□□ 0.95
SLC4A11Q8NBS3 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.01■□□□□ 0.95
SLC4A11Q8NBS3 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SLC4A11Q8NBS3 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.01■□□□□ 0.95
SLC4A11Q8NBS3 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.01■□□□□ 0.95
SLC4A11Q8NBS3 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
SLC4A11Q8NBS3 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SLC4A11Q8NBS3 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SLC4A11Q8NBS3 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
SLC4A11Q8NBS3 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.01■□□□□ 0.95
SLC4A11Q8NBS3 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC4A11Q8NBS3 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC4A11Q8NBS3 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC4A11Q8NBS3 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21■□□□□ 0.95
SLC4A11Q8NBS3 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SLC4A11Q8NBS3 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21■□□□□ 0.95
SLC4A11Q8NBS3 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC4A11Q8NBS3 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21■□□□□ 0.95
SLC4A11Q8NBS3 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21■□□□□ 0.95
SLC4A11Q8NBS3 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC4A11Q8NBS3 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21■□□□□ 0.95
SLC4A11Q8NBS3 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21■□□□□ 0.95
SLC4A11Q8NBS3 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21■□□□□ 0.95
SLC4A11Q8NBS3 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SLC4A11Q8NBS3 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC4A11Q8NBS3 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21■□□□□ 0.95
SLC4A11Q8NBS3 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21■□□□□ 0.95
SLC4A11Q8NBS3 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21■□□□□ 0.95
SLC4A11Q8NBS3 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
SLC4A11Q8NBS3 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
SLC4A11Q8NBS3 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
SLC4A11Q8NBS3 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC4A11Q8NBS3 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC4A11Q8NBS3 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SLC4A11Q8NBS3 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC4A11Q8NBS3 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
SLC4A11Q8NBS3 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.99■□□□□ 0.95
SLC4A11Q8NBS3 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.99■□□□□ 0.95
SLC4A11Q8NBS3 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.99■□□□□ 0.95
SLC4A11Q8NBS3 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SLC4A11Q8NBS3 RN7SL471P-201ENST00000580476 299 ntBASIC20.99■□□□□ 0.95
SLC4A11Q8NBS3 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.99■□□□□ 0.95
SLC4A11Q8NBS3 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.99■□□□□ 0.95
SLC4A11Q8NBS3 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC4A11Q8NBS3 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC4A11Q8NBS3 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC4A11Q8NBS3 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC4A11Q8NBS3 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC4A11Q8NBS3 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms