Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
LINC01555Q8NAE3 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.1■□□□□ 0.65
LINC01555Q8NAE3 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LINC01555Q8NAE3 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LINC01555Q8NAE3 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.1■□□□□ 0.65
LINC01555Q8NAE3 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LINC01555Q8NAE3 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.09■□□□□ 0.65
LINC01555Q8NAE3 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
LINC01555Q8NAE3 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
LINC01555Q8NAE3 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LINC01555Q8NAE3 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
LINC01555Q8NAE3 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LINC01555Q8NAE3 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LINC01555Q8NAE3 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LINC01555Q8NAE3 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.09■□□□□ 0.65
LINC01555Q8NAE3 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LINC01555Q8NAE3 AC239809.2-201ENST00000415381 517 ntBASIC19.09■□□□□ 0.65
LINC01555Q8NAE3 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.09■□□□□ 0.65
LINC01555Q8NAE3 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.09■□□□□ 0.65
LINC01555Q8NAE3 PRKY-204ENST00000533551 1019 ntBASIC19.09■□□□□ 0.65
LINC01555Q8NAE3 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.09■□□□□ 0.65
LINC01555Q8NAE3 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
LINC01555Q8NAE3 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LINC01555Q8NAE3 AP001271.2-201ENST00000624018 1556 ntBASIC19.09■□□□□ 0.65
LINC01555Q8NAE3 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
LINC01555Q8NAE3 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LINC01555Q8NAE3 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
LINC01555Q8NAE3 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LINC01555Q8NAE3 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LINC01555Q8NAE3 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LINC01555Q8NAE3 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.09■□□□□ 0.65
LINC01555Q8NAE3 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
LINC01555Q8NAE3 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LINC01555Q8NAE3 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LINC01555Q8NAE3 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.08■□□□□ 0.65
LINC01555Q8NAE3 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
LINC01555Q8NAE3 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
LINC01555Q8NAE3 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
LINC01555Q8NAE3 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.08■□□□□ 0.65
LINC01555Q8NAE3 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
LINC01555Q8NAE3 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LINC01555Q8NAE3 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LINC01555Q8NAE3 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LINC01555Q8NAE3 KRASP1-201ENST00000407852 552 ntBASIC19.08■□□□□ 0.64
LINC01555Q8NAE3 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
LINC01555Q8NAE3 AC133681.1-201ENST00000465482 601 ntBASIC19.08■□□□□ 0.64
LINC01555Q8NAE3 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.08■□□□□ 0.64
LINC01555Q8NAE3 AC142381.4-202ENST00000563973 229 ntBASIC19.08■□□□□ 0.64
LINC01555Q8NAE3 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.08■□□□□ 0.64
LINC01555Q8NAE3 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.08■□□□□ 0.64
LINC01555Q8NAE3 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.08■□□□□ 0.64
LINC01555Q8NAE3 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.08■□□□□ 0.64
LINC01555Q8NAE3 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.08■□□□□ 0.64
LINC01555Q8NAE3 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
LINC01555Q8NAE3 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LINC01555Q8NAE3 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
LINC01555Q8NAE3 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LINC01555Q8NAE3 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LINC01555Q8NAE3 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LINC01555Q8NAE3 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
LINC01555Q8NAE3 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LINC01555Q8NAE3 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.07■□□□□ 0.64
LINC01555Q8NAE3 AC009237.14-201ENST00000609975 1594 ntBASIC19.07■□□□□ 0.64
LINC01555Q8NAE3 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LINC01555Q8NAE3 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.07■□□□□ 0.64
LINC01555Q8NAE3 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
LINC01555Q8NAE3 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.07■□□□□ 0.64
LINC01555Q8NAE3 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
LINC01555Q8NAE3 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.07■□□□□ 0.64
LINC01555Q8NAE3 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
LINC01555Q8NAE3 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LINC01555Q8NAE3 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LINC01555Q8NAE3 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
LINC01555Q8NAE3 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.07■□□□□ 0.64
LINC01555Q8NAE3 AL158047.1-201ENST00000445918 881 ntBASIC19.07■□□□□ 0.64
LINC01555Q8NAE3 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.07■□□□□ 0.64
LINC01555Q8NAE3 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.07■□□□□ 0.64
LINC01555Q8NAE3 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.07■□□□□ 0.64
LINC01555Q8NAE3 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LINC01555Q8NAE3 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.07■□□□□ 0.64
LINC01555Q8NAE3 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LINC01555Q8NAE3 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
LINC01555Q8NAE3 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.07■□□□□ 0.64
LINC01555Q8NAE3 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.07■□□□□ 0.64
LINC01555Q8NAE3 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
LINC01555Q8NAE3 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
LINC01555Q8NAE3 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LINC01555Q8NAE3 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LINC01555Q8NAE3 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
LINC01555Q8NAE3 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.06■□□□□ 0.64
LINC01555Q8NAE3 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.06■□□□□ 0.64
LINC01555Q8NAE3 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LINC01555Q8NAE3 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LINC01555Q8NAE3 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
LINC01555Q8NAE3 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LINC01555Q8NAE3 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LINC01555Q8NAE3 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LINC01555Q8NAE3 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.06■□□□□ 0.64
LINC01555Q8NAE3 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
LINC01555Q8NAE3 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms