Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC01561Q8N1V8 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC01561Q8N1V8 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LINC01561Q8N1V8 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LINC01561Q8N1V8 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
LINC01561Q8N1V8 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC13.28□□□□□ -0.28
LINC01561Q8N1V8 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC01561Q8N1V8 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
LINC01561Q8N1V8 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LINC01561Q8N1V8 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC13.28□□□□□ -0.28
LINC01561Q8N1V8 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC13.28□□□□□ -0.28
LINC01561Q8N1V8 UBE2DNL-204ENST00000602536 740 ntBASIC13.28□□□□□ -0.28
LINC01561Q8N1V8 AC010536.3-201ENST00000620306 533 ntBASIC13.28□□□□□ -0.28
LINC01561Q8N1V8 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC13.28□□□□□ -0.28
LINC01561Q8N1V8 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC01561Q8N1V8 STK25-205ENST00000405883 1904 ntTSL 2 BASIC13.28□□□□□ -0.28
LINC01561Q8N1V8 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC01561Q8N1V8 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
LINC01561Q8N1V8 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC01561Q8N1V8 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
LINC01561Q8N1V8 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LINC01561Q8N1V8 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC01561Q8N1V8 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LINC01561Q8N1V8 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
LINC01561Q8N1V8 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC13.28□□□□□ -0.28
LINC01561Q8N1V8 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC13.28□□□□□ -0.28
LINC01561Q8N1V8 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
LINC01561Q8N1V8 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC01561Q8N1V8 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
LINC01561Q8N1V8 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
LINC01561Q8N1V8 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
LINC01561Q8N1V8 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC13.27□□□□□ -0.28
LINC01561Q8N1V8 LINC01465-201ENST00000408887 1940 ntBASIC13.27□□□□□ -0.28
LINC01561Q8N1V8 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC13.27□□□□□ -0.28
LINC01561Q8N1V8 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
LINC01561Q8N1V8 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC13.27□□□□□ -0.28
LINC01561Q8N1V8 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LINC01561Q8N1V8 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
LINC01561Q8N1V8 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC13.27□□□□□ -0.29
LINC01561Q8N1V8 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC01561Q8N1V8 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC13.27□□□□□ -0.29
LINC01561Q8N1V8 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC01561Q8N1V8 PARP1-202ENST00000366792 553 ntTSL 3 BASIC13.27□□□□□ -0.29
LINC01561Q8N1V8 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
LINC01561Q8N1V8 MFSD11-216ENST00000590393 1141 ntBASIC13.27□□□□□ -0.29
LINC01561Q8N1V8 AC013268.1-206ENST00000638368 961 ntBASIC13.27□□□□□ -0.29
LINC01561Q8N1V8 AC112229.1-201ENST00000639295 961 ntBASIC13.27□□□□□ -0.29
LINC01561Q8N1V8 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
LINC01561Q8N1V8 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
LINC01561Q8N1V8 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC01561Q8N1V8 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
LINC01561Q8N1V8 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
LINC01561Q8N1V8 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC01561Q8N1V8 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC01561Q8N1V8 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC01561Q8N1V8 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LINC01561Q8N1V8 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC01561Q8N1V8 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
LINC01561Q8N1V8 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC01561Q8N1V8 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC01561Q8N1V8 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
LINC01561Q8N1V8 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01561Q8N1V8 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
LINC01561Q8N1V8 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01561Q8N1V8 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01561Q8N1V8 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01561Q8N1V8 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01561Q8N1V8 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01561Q8N1V8 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
LINC01561Q8N1V8 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01561Q8N1V8 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01561Q8N1V8 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC13.26□□□□□ -0.29
LINC01561Q8N1V8 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
LINC01561Q8N1V8 KRT18P11-201ENST00000435214 1283 ntBASIC13.26□□□□□ -0.29
LINC01561Q8N1V8 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01561Q8N1V8 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01561Q8N1V8 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC13.26□□□□□ -0.29
LINC01561Q8N1V8 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC13.26□□□□□ -0.29
LINC01561Q8N1V8 AC023632.3-201ENST00000521633 145 ntBASIC13.26□□□□□ -0.29
LINC01561Q8N1V8 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01561Q8N1V8 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
LINC01561Q8N1V8 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC13.26□□□□□ -0.29
LINC01561Q8N1V8 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01561Q8N1V8 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC13.26□□□□□ -0.29
LINC01561Q8N1V8 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
LINC01561Q8N1V8 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
LINC01561Q8N1V8 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01561Q8N1V8 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC13.25□□□□□ -0.29
LINC01561Q8N1V8 PWWP2AP1-201ENST00000429776 2273 ntBASIC13.25□□□□□ -0.29
LINC01561Q8N1V8 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01561Q8N1V8 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01561Q8N1V8 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
LINC01561Q8N1V8 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01561Q8N1V8 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC13.25□□□□□ -0.29
LINC01561Q8N1V8 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01561Q8N1V8 PHGDH-210ENST00000641115 1638 ntBASIC13.25□□□□□ -0.29
LINC01561Q8N1V8 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01561Q8N1V8 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01561Q8N1V8 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01561Q8N1V8 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms