Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.66■□□□□ 0.58
CCDC116Q8IYX3 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC116Q8IYX3 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC116Q8IYX3 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC116Q8IYX3 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC116Q8IYX3 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC116Q8IYX3 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC116Q8IYX3 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC116Q8IYX3 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC116Q8IYX3 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC116Q8IYX3 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC116Q8IYX3 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC116Q8IYX3 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC116Q8IYX3 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.65■□□□□ 0.58
CCDC116Q8IYX3 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC116Q8IYX3 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.65■□□□□ 0.58
CCDC116Q8IYX3 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC116Q8IYX3 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC116Q8IYX3 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CCDC116Q8IYX3 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC116Q8IYX3 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC116Q8IYX3 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC116Q8IYX3 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CCDC116Q8IYX3 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC116Q8IYX3 ID1-201ENST00000376105 1233 ntBASIC18.65■□□□□ 0.58
CCDC116Q8IYX3 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.65■□□□□ 0.58
CCDC116Q8IYX3 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC116Q8IYX3 AC083880.1-201ENST00000608266 535 ntBASIC18.65■□□□□ 0.58
CCDC116Q8IYX3 AC006557.6-201ENST00000623071 864 ntBASIC18.65■□□□□ 0.58
CCDC116Q8IYX3 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CCDC116Q8IYX3 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC116Q8IYX3 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC116Q8IYX3 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC116Q8IYX3 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC116Q8IYX3 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC116Q8IYX3 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC116Q8IYX3 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC116Q8IYX3 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC116Q8IYX3 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC116Q8IYX3 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
CCDC116Q8IYX3 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC116Q8IYX3 AC092368.3-202ENST00000574180 1591 ntBASIC18.64■□□□□ 0.58
CCDC116Q8IYX3 PHGDH-210ENST00000641115 1638 ntBASIC18.64■□□□□ 0.57
CCDC116Q8IYX3 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC116Q8IYX3 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
CCDC116Q8IYX3 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC116Q8IYX3 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC116Q8IYX3 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC116Q8IYX3 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC116Q8IYX3 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.64■□□□□ 0.57
CCDC116Q8IYX3 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.64■□□□□ 0.57
CCDC116Q8IYX3 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.64■□□□□ 0.57
CCDC116Q8IYX3 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CCDC116Q8IYX3 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC116Q8IYX3 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC116Q8IYX3 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC116Q8IYX3 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC116Q8IYX3 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CCDC116Q8IYX3 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CCDC116Q8IYX3 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC116Q8IYX3 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.64■□□□□ 0.57
CCDC116Q8IYX3 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC116Q8IYX3 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC116Q8IYX3 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC116Q8IYX3 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CCDC116Q8IYX3 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC116Q8IYX3 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CCDC116Q8IYX3 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC116Q8IYX3 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC116Q8IYX3 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC116Q8IYX3 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC116Q8IYX3 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC116Q8IYX3 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CCDC116Q8IYX3 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC116Q8IYX3 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC116Q8IYX3 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC116Q8IYX3 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC116Q8IYX3 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC116Q8IYX3 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.63■□□□□ 0.57
CCDC116Q8IYX3 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC116Q8IYX3 HLA-B-256ENST00000639848 1089 ntBASIC18.63■□□□□ 0.57
CCDC116Q8IYX3 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC116Q8IYX3 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC116Q8IYX3 AC009237.14-201ENST00000609975 1594 ntBASIC18.63■□□□□ 0.57
CCDC116Q8IYX3 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC116Q8IYX3 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC116Q8IYX3 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC116Q8IYX3 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC116Q8IYX3 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC116Q8IYX3 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC116Q8IYX3 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC116Q8IYX3 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC116Q8IYX3 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC116Q8IYX3 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC116Q8IYX3 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC116Q8IYX3 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CCDC116Q8IYX3 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC116Q8IYX3 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC116Q8IYX3 AL158211.5-201ENST00000623583 2518 ntBASIC18.62■□□□□ 0.57
CCDC116Q8IYX3 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms