Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.12■□□□□ 0.49
ZNF440Q8IYI8 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF440Q8IYI8 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF440Q8IYI8 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.12■□□□□ 0.49
ZNF440Q8IYI8 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
ZNF440Q8IYI8 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF440Q8IYI8 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
ZNF440Q8IYI8 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF440Q8IYI8 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF440Q8IYI8 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF440Q8IYI8 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF440Q8IYI8 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
ZNF440Q8IYI8 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF440Q8IYI8 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF440Q8IYI8 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.11■□□□□ 0.49
ZNF440Q8IYI8 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF440Q8IYI8 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF440Q8IYI8 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
ZNF440Q8IYI8 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.11■□□□□ 0.49
ZNF440Q8IYI8 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF440Q8IYI8 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.11■□□□□ 0.49
ZNF440Q8IYI8 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.11■□□□□ 0.49
ZNF440Q8IYI8 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF440Q8IYI8 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.11■□□□□ 0.49
ZNF440Q8IYI8 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF440Q8IYI8 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.11■□□□□ 0.49
ZNF440Q8IYI8 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF440Q8IYI8 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.11■□□□□ 0.49
ZNF440Q8IYI8 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF440Q8IYI8 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
ZNF440Q8IYI8 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF440Q8IYI8 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.11■□□□□ 0.49
ZNF440Q8IYI8 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF440Q8IYI8 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
ZNF440Q8IYI8 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.11■□□□□ 0.49
ZNF440Q8IYI8 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.11■□□□□ 0.49
ZNF440Q8IYI8 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF440Q8IYI8 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF440Q8IYI8 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
ZNF440Q8IYI8 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.1■□□□□ 0.49
ZNF440Q8IYI8 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.1■□□□□ 0.49
ZNF440Q8IYI8 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF440Q8IYI8 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF440Q8IYI8 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF440Q8IYI8 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF440Q8IYI8 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.1■□□□□ 0.49
ZNF440Q8IYI8 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.1■□□□□ 0.49
ZNF440Q8IYI8 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.1■□□□□ 0.49
ZNF440Q8IYI8 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.1■□□□□ 0.49
ZNF440Q8IYI8 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.1■□□□□ 0.49
ZNF440Q8IYI8 HLA-B-256ENST00000639848 1089 ntBASIC18.1■□□□□ 0.49
ZNF440Q8IYI8 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
ZNF440Q8IYI8 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.1■□□□□ 0.49
ZNF440Q8IYI8 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF440Q8IYI8 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF440Q8IYI8 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.1■□□□□ 0.49
ZNF440Q8IYI8 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF440Q8IYI8 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF440Q8IYI8 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
ZNF440Q8IYI8 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF440Q8IYI8 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.09■□□□□ 0.49
ZNF440Q8IYI8 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF440Q8IYI8 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF440Q8IYI8 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF440Q8IYI8 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF440Q8IYI8 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF440Q8IYI8 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.09■□□□□ 0.49
ZNF440Q8IYI8 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.09■□□□□ 0.49
ZNF440Q8IYI8 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF440Q8IYI8 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF440Q8IYI8 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF440Q8IYI8 AL138781.1-201ENST00000566567 1274 ntBASIC18.09■□□□□ 0.49
ZNF440Q8IYI8 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.09■□□□□ 0.49
ZNF440Q8IYI8 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.09■□□□□ 0.49
ZNF440Q8IYI8 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.09■□□□□ 0.49
ZNF440Q8IYI8 AL109923.1-201ENST00000618799 583 ntBASIC18.09■□□□□ 0.49
ZNF440Q8IYI8 MYC-209ENST00000641252 345 ntBASIC18.09■□□□□ 0.49
ZNF440Q8IYI8 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
ZNF440Q8IYI8 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.09■□□□□ 0.49
ZNF440Q8IYI8 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.09■□□□□ 0.49
ZNF440Q8IYI8 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
ZNF440Q8IYI8 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.09■□□□□ 0.49
ZNF440Q8IYI8 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.09■□□□□ 0.49
ZNF440Q8IYI8 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF440Q8IYI8 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF440Q8IYI8 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.09■□□□□ 0.49
ZNF440Q8IYI8 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.08■□□□□ 0.49
ZNF440Q8IYI8 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.08■□□□□ 0.49
ZNF440Q8IYI8 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
ZNF440Q8IYI8 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
ZNF440Q8IYI8 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
ZNF440Q8IYI8 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
ZNF440Q8IYI8 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
ZNF440Q8IYI8 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ZNF440Q8IYI8 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ZNF440Q8IYI8 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.08■□□□□ 0.48
ZNF440Q8IYI8 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.08■□□□□ 0.48
ZNF440Q8IYI8 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF440Q8IYI8 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF440Q8IYI8 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms