Protein–RNA interactions for Protein: Q8IYE0

CCDC146, Coiled-coil domain-containing protein 146, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146Q8IYE0 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CCDC146Q8IYE0 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CCDC146Q8IYE0 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
CCDC146Q8IYE0 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC26.27■■□□□ 1.8
CCDC146Q8IYE0 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC26.27■■□□□ 1.8
CCDC146Q8IYE0 FAM201B-201ENST00000458407 597 ntBASIC26.27■■□□□ 1.8
CCDC146Q8IYE0 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC26.27■■□□□ 1.8
CCDC146Q8IYE0 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
CCDC146Q8IYE0 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CCDC146Q8IYE0 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC26.27■■□□□ 1.8
CCDC146Q8IYE0 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC26.27■■□□□ 1.8
CCDC146Q8IYE0 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CCDC146Q8IYE0 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
CCDC146Q8IYE0 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CCDC146Q8IYE0 AC125437.2-201ENST00000625180 2167 ntBASIC26.27■■□□□ 1.8
CCDC146Q8IYE0 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
CCDC146Q8IYE0 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CCDC146Q8IYE0 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC26.27■■□□□ 1.8
CCDC146Q8IYE0 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
CCDC146Q8IYE0 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCDC146Q8IYE0 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCDC146Q8IYE0 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCDC146Q8IYE0 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CCDC146Q8IYE0 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC26.26■■□□□ 1.79
CCDC146Q8IYE0 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC26.26■■□□□ 1.79
CCDC146Q8IYE0 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC26.26■■□□□ 1.79
CCDC146Q8IYE0 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CCDC146Q8IYE0 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
CCDC146Q8IYE0 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCDC146Q8IYE0 CALM3-202ENST00000391918 702 ntTSL 2 BASIC26.26■■□□□ 1.79
CCDC146Q8IYE0 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC26.26■■□□□ 1.79
CCDC146Q8IYE0 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC26.26■■□□□ 1.79
CCDC146Q8IYE0 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCDC146Q8IYE0 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC26.26■■□□□ 1.79
CCDC146Q8IYE0 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC146Q8IYE0 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC26.25■■□□□ 1.79
CCDC146Q8IYE0 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC146Q8IYE0 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC146Q8IYE0 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC146Q8IYE0 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC26.25■■□□□ 1.79
CCDC146Q8IYE0 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC146Q8IYE0 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC146Q8IYE0 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC146Q8IYE0 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC146Q8IYE0 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC26.25■■□□□ 1.79
CCDC146Q8IYE0 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC146Q8IYE0 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC146Q8IYE0 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC26.25■■□□□ 1.79
CCDC146Q8IYE0 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC26.25■■□□□ 1.79
CCDC146Q8IYE0 PNN-205ENST00000556530 601 ntTSL 2 BASIC26.25■■□□□ 1.79
CCDC146Q8IYE0 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC26.25■■□□□ 1.79
CCDC146Q8IYE0 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC26.25■■□□□ 1.79
CCDC146Q8IYE0 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC146Q8IYE0 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC26.25■■□□□ 1.79
CCDC146Q8IYE0 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC26.25■■□□□ 1.79
CCDC146Q8IYE0 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC146Q8IYE0 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CCDC146Q8IYE0 AC116351.2-201ENST00000606540 1585 ntBASIC26.24■■□□□ 1.79
CCDC146Q8IYE0 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC26.24■■□□□ 1.79
CCDC146Q8IYE0 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
CCDC146Q8IYE0 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC26.24■■□□□ 1.79
CCDC146Q8IYE0 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
CCDC146Q8IYE0 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CCDC146Q8IYE0 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC26.24■■□□□ 1.79
CCDC146Q8IYE0 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC26.24■■□□□ 1.79
CCDC146Q8IYE0 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
CCDC146Q8IYE0 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CCDC146Q8IYE0 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CCDC146Q8IYE0 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CCDC146Q8IYE0 BID-204ENST00000399767 2129 ntTSL 2 BASIC26.24■■□□□ 1.79
CCDC146Q8IYE0 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CCDC146Q8IYE0 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CCDC146Q8IYE0 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC26.24■■□□□ 1.79
CCDC146Q8IYE0 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CCDC146Q8IYE0 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CCDC146Q8IYE0 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
CCDC146Q8IYE0 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
CCDC146Q8IYE0 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CCDC146Q8IYE0 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CCDC146Q8IYE0 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
CCDC146Q8IYE0 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CCDC146Q8IYE0 PRORSD1P-201ENST00000295112 541 ntBASIC26.23■■□□□ 1.79
CCDC146Q8IYE0 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
CCDC146Q8IYE0 KRT17P3-201ENST00000420566 1262 ntBASIC26.23■■□□□ 1.79
CCDC146Q8IYE0 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC26.23■■□□□ 1.79
CCDC146Q8IYE0 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC26.23■■□□□ 1.79
CCDC146Q8IYE0 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
CCDC146Q8IYE0 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CCDC146Q8IYE0 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC26.23■■□□□ 1.79
CCDC146Q8IYE0 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CCDC146Q8IYE0 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CCDC146Q8IYE0 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CCDC146Q8IYE0 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
CCDC146Q8IYE0 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
CCDC146Q8IYE0 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CCDC146Q8IYE0 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC26.22■■□□□ 1.79
CCDC146Q8IYE0 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CCDC146Q8IYE0 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CCDC146Q8IYE0 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CCDC146Q8IYE0 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC26.22■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms