Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.52
DDX60Q8IY21 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
DDX60Q8IY21 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
DDX60Q8IY21 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
DDX60Q8IY21 PALM-208ENST00000592155 2272 ntTSL 4 BASIC24.57■■□□□ 1.52
DDX60Q8IY21 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC24.57■■□□□ 1.52
DDX60Q8IY21 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
DDX60Q8IY21 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
DDX60Q8IY21 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
DDX60Q8IY21 AC004980.1-204ENST00000429707 299 ntBASIC24.57■■□□□ 1.52
DDX60Q8IY21 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC24.57■■□□□ 1.52
DDX60Q8IY21 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC24.57■■□□□ 1.52
DDX60Q8IY21 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
DDX60Q8IY21 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
DDX60Q8IY21 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
DDX60Q8IY21 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC24.56■■□□□ 1.52
DDX60Q8IY21 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC24.56■■□□□ 1.52
DDX60Q8IY21 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC24.56■■□□□ 1.52
DDX60Q8IY21 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
DDX60Q8IY21 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC24.56■■□□□ 1.52
DDX60Q8IY21 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
DDX60Q8IY21 LINC01568-207ENST00000641790 1380 ntBASIC24.56■■□□□ 1.52
DDX60Q8IY21 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC24.55■■□□□ 1.52
DDX60Q8IY21 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
DDX60Q8IY21 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC24.55■■□□□ 1.52
DDX60Q8IY21 KRT18P35-201ENST00000510488 1269 ntBASIC24.55■■□□□ 1.52
DDX60Q8IY21 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
DDX60Q8IY21 C2orf69P3-201ENST00000565542 1120 ntBASIC24.55■■□□□ 1.52
DDX60Q8IY21 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC24.55■■□□□ 1.52
DDX60Q8IY21 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
DDX60Q8IY21 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC24.55■■□□□ 1.52
DDX60Q8IY21 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
DDX60Q8IY21 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
DDX60Q8IY21 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
DDX60Q8IY21 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
DDX60Q8IY21 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC24.55■■□□□ 1.52
DDX60Q8IY21 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC24.55■■□□□ 1.52
DDX60Q8IY21 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
DDX60Q8IY21 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
DDX60Q8IY21 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
DDX60Q8IY21 AC011506.1-201ENST00000474329 610 ntBASIC24.55■■□□□ 1.52
DDX60Q8IY21 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC24.55■■□□□ 1.52
DDX60Q8IY21 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
DDX60Q8IY21 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
DDX60Q8IY21 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
DDX60Q8IY21 KRT16P6-202ENST00000425692 1426 ntBASIC24.54■■□□□ 1.52
DDX60Q8IY21 SMG8-203ENST00000578922 2178 ntBASIC24.54■■□□□ 1.52
DDX60Q8IY21 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC24.54■■□□□ 1.52
DDX60Q8IY21 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
DDX60Q8IY21 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC24.54■■□□□ 1.52
DDX60Q8IY21 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC24.54■■□□□ 1.52
DDX60Q8IY21 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC24.54■■□□□ 1.52
DDX60Q8IY21 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
DDX60Q8IY21 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
DDX60Q8IY21 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
DDX60Q8IY21 CBFB-203ENST00000561924 584 ntTSL 5 BASIC24.54■■□□□ 1.52
DDX60Q8IY21 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
DDX60Q8IY21 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC24.54■■□□□ 1.52
DDX60Q8IY21 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
DDX60Q8IY21 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC24.53■■□□□ 1.52
DDX60Q8IY21 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
DDX60Q8IY21 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC24.53■■□□□ 1.52
DDX60Q8IY21 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC24.53■■□□□ 1.52
DDX60Q8IY21 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC24.53■■□□□ 1.52
DDX60Q8IY21 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
DDX60Q8IY21 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC24.53■■□□□ 1.52
DDX60Q8IY21 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
DDX60Q8IY21 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
DDX60Q8IY21 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC24.52■■□□□ 1.52
DDX60Q8IY21 TUBB8P6-201ENST00000436895 1288 ntBASIC24.52■■□□□ 1.52
DDX60Q8IY21 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC24.52■■□□□ 1.52
DDX60Q8IY21 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC24.52■■□□□ 1.52
DDX60Q8IY21 NAPSB-206ENST00000562112 1266 ntBASIC24.52■■□□□ 1.52
DDX60Q8IY21 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
DDX60Q8IY21 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
DDX60Q8IY21 MOK-225ENST00000522867 1883 ntTSL 5 BASIC24.52■■□□□ 1.52
DDX60Q8IY21 AC073508.3-201ENST00000619697 1419 ntBASIC24.52■■□□□ 1.52
DDX60Q8IY21 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
DDX60Q8IY21 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC24.52■■□□□ 1.52
DDX60Q8IY21 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC24.52■■□□□ 1.52
DDX60Q8IY21 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
DDX60Q8IY21 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC24.52■■□□□ 1.52
DDX60Q8IY21 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
DDX60Q8IY21 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
DDX60Q8IY21 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC24.52■■□□□ 1.52
DDX60Q8IY21 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC24.52■■□□□ 1.52
DDX60Q8IY21 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
DDX60Q8IY21 FSCN1P1-201ENST00000568912 1481 ntBASIC24.52■■□□□ 1.51
DDX60Q8IY21 RCC2P6-201ENST00000526625 1557 ntBASIC24.51■■□□□ 1.51
DDX60Q8IY21 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
DDX60Q8IY21 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
DDX60Q8IY21 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
DDX60Q8IY21 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC24.51■■□□□ 1.51
DDX60Q8IY21 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
DDX60Q8IY21 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC24.51■■□□□ 1.51
DDX60Q8IY21 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
DDX60Q8IY21 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
DDX60Q8IY21 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC24.51■■□□□ 1.51
DDX60Q8IY21 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
DDX60Q8IY21 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms