Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.98■■□□□ 1.11
CCDC65Q8IXS2 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.98■■□□□ 1.11
CCDC65Q8IXS2 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.98■■□□□ 1.11
CCDC65Q8IXS2 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.98■■□□□ 1.11
CCDC65Q8IXS2 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CCDC65Q8IXS2 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.98■■□□□ 1.11
CCDC65Q8IXS2 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CCDC65Q8IXS2 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CCDC65Q8IXS2 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.98■■□□□ 1.11
CCDC65Q8IXS2 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CCDC65Q8IXS2 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.98■■□□□ 1.11
CCDC65Q8IXS2 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.98■■□□□ 1.11
CCDC65Q8IXS2 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCDC65Q8IXS2 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CCDC65Q8IXS2 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CCDC65Q8IXS2 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCDC65Q8IXS2 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCDC65Q8IXS2 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCDC65Q8IXS2 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
CCDC65Q8IXS2 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.97■■□□□ 1.11
CCDC65Q8IXS2 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCDC65Q8IXS2 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
CCDC65Q8IXS2 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.97■■□□□ 1.11
CCDC65Q8IXS2 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
CCDC65Q8IXS2 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CCDC65Q8IXS2 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
CCDC65Q8IXS2 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCDC65Q8IXS2 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCDC65Q8IXS2 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.97■■□□□ 1.11
CCDC65Q8IXS2 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCDC65Q8IXS2 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
CCDC65Q8IXS2 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCDC65Q8IXS2 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
CCDC65Q8IXS2 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.97■■□□□ 1.11
CCDC65Q8IXS2 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.97■■□□□ 1.11
CCDC65Q8IXS2 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCDC65Q8IXS2 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CCDC65Q8IXS2 AC125437.2-201ENST00000625180 2167 ntBASIC21.97■■□□□ 1.11
CCDC65Q8IXS2 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.96■■□□□ 1.11
CCDC65Q8IXS2 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21.96■■□□□ 1.11
CCDC65Q8IXS2 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC65Q8IXS2 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC65Q8IXS2 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CCDC65Q8IXS2 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC65Q8IXS2 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC65Q8IXS2 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC65Q8IXS2 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.96■■□□□ 1.11
CCDC65Q8IXS2 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC65Q8IXS2 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.96■■□□□ 1.11
CCDC65Q8IXS2 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.96■■□□□ 1.11
CCDC65Q8IXS2 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.96■■□□□ 1.11
CCDC65Q8IXS2 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC65Q8IXS2 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC65Q8IXS2 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.96■■□□□ 1.11
CCDC65Q8IXS2 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.96■■□□□ 1.11
CCDC65Q8IXS2 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC65Q8IXS2 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC65Q8IXS2 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.11
CCDC65Q8IXS2 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.95■■□□□ 1.1
CCDC65Q8IXS2 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
CCDC65Q8IXS2 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC65Q8IXS2 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.95■■□□□ 1.1
CCDC65Q8IXS2 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC65Q8IXS2 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC65Q8IXS2 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC65Q8IXS2 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC65Q8IXS2 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC65Q8IXS2 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC65Q8IXS2 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.95■■□□□ 1.1
CCDC65Q8IXS2 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.95■■□□□ 1.1
CCDC65Q8IXS2 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.95■■□□□ 1.1
CCDC65Q8IXS2 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.95■■□□□ 1.1
CCDC65Q8IXS2 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC65Q8IXS2 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.95■■□□□ 1.1
CCDC65Q8IXS2 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.95■■□□□ 1.1
CCDC65Q8IXS2 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.95■■□□□ 1.1
CCDC65Q8IXS2 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.95■■□□□ 1.1
CCDC65Q8IXS2 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.95■■□□□ 1.1
CCDC65Q8IXS2 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.95■■□□□ 1.1
CCDC65Q8IXS2 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC65Q8IXS2 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC65Q8IXS2 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC65Q8IXS2 AC018553.1-201ENST00000616682 1458 ntBASIC21.95■■□□□ 1.1
CCDC65Q8IXS2 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.95■■□□□ 1.1
CCDC65Q8IXS2 AC116351.2-201ENST00000606540 1585 ntBASIC21.95■■□□□ 1.1
CCDC65Q8IXS2 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC65Q8IXS2 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.94■■□□□ 1.1
CCDC65Q8IXS2 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.94■■□□□ 1.1
CCDC65Q8IXS2 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC65Q8IXS2 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CCDC65Q8IXS2 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
CCDC65Q8IXS2 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC65Q8IXS2 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC65Q8IXS2 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.94■■□□□ 1.1
CCDC65Q8IXS2 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.94■■□□□ 1.1
CCDC65Q8IXS2 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.94■■□□□ 1.1
CCDC65Q8IXS2 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.94■■□□□ 1.1
CCDC65Q8IXS2 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC65Q8IXS2 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC65Q8IXS2 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms