Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM42Q8IWZ5 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM42Q8IWZ5 KRT18P20-201ENST00000548986 1279 ntBASIC19.7■□□□□ 0.74
TRIM42Q8IWZ5 CCDC92B-201ENST00000575506 885 ntBASIC19.7■□□□□ 0.74
TRIM42Q8IWZ5 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.7■□□□□ 0.74
TRIM42Q8IWZ5 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.7■□□□□ 0.74
TRIM42Q8IWZ5 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.7■□□□□ 0.74
TRIM42Q8IWZ5 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM42Q8IWZ5 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM42Q8IWZ5 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.7■□□□□ 0.74
TRIM42Q8IWZ5 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM42Q8IWZ5 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TRIM42Q8IWZ5 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM42Q8IWZ5 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM42Q8IWZ5 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM42Q8IWZ5 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM42Q8IWZ5 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM42Q8IWZ5 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM42Q8IWZ5 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.69■□□□□ 0.74
TRIM42Q8IWZ5 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM42Q8IWZ5 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
TRIM42Q8IWZ5 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.69■□□□□ 0.74
TRIM42Q8IWZ5 LINC01465-201ENST00000408887 1940 ntBASIC19.69■□□□□ 0.74
TRIM42Q8IWZ5 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM42Q8IWZ5 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
TRIM42Q8IWZ5 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM42Q8IWZ5 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM42Q8IWZ5 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.69■□□□□ 0.74
TRIM42Q8IWZ5 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.69■□□□□ 0.74
TRIM42Q8IWZ5 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM42Q8IWZ5 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.69■□□□□ 0.74
TRIM42Q8IWZ5 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.69■□□□□ 0.74
TRIM42Q8IWZ5 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.69■□□□□ 0.74
TRIM42Q8IWZ5 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.69■□□□□ 0.74
TRIM42Q8IWZ5 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.69■□□□□ 0.74
TRIM42Q8IWZ5 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM42Q8IWZ5 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM42Q8IWZ5 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.69■□□□□ 0.74
TRIM42Q8IWZ5 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.69■□□□□ 0.74
TRIM42Q8IWZ5 AC090340.1-201ENST00000620778 4980 ntBASIC19.69■□□□□ 0.74
TRIM42Q8IWZ5 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM42Q8IWZ5 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.69■□□□□ 0.74
TRIM42Q8IWZ5 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
TRIM42Q8IWZ5 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM42Q8IWZ5 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.69■□□□□ 0.74
TRIM42Q8IWZ5 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM42Q8IWZ5 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
TRIM42Q8IWZ5 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
TRIM42Q8IWZ5 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.68■□□□□ 0.74
TRIM42Q8IWZ5 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM42Q8IWZ5 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.68■□□□□ 0.74
TRIM42Q8IWZ5 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM42Q8IWZ5 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM42Q8IWZ5 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM42Q8IWZ5 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
TRIM42Q8IWZ5 CDV3P1-201ENST00000471403 739 ntBASIC19.68■□□□□ 0.74
TRIM42Q8IWZ5 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.68■□□□□ 0.74
TRIM42Q8IWZ5 AC087623.3-201ENST00000607047 1098 ntBASIC19.68■□□□□ 0.74
TRIM42Q8IWZ5 MIR5787-201ENST00000611784 55 ntBASIC19.68■□□□□ 0.74
TRIM42Q8IWZ5 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.68■□□□□ 0.74
TRIM42Q8IWZ5 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM42Q8IWZ5 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM42Q8IWZ5 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM42Q8IWZ5 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.68■□□□□ 0.74
TRIM42Q8IWZ5 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM42Q8IWZ5 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM42Q8IWZ5 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM42Q8IWZ5 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM42Q8IWZ5 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM42Q8IWZ5 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM42Q8IWZ5 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM42Q8IWZ5 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
TRIM42Q8IWZ5 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM42Q8IWZ5 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM42Q8IWZ5 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.67■□□□□ 0.74
TRIM42Q8IWZ5 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.67■□□□□ 0.74
TRIM42Q8IWZ5 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM42Q8IWZ5 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM42Q8IWZ5 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM42Q8IWZ5 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM42Q8IWZ5 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM42Q8IWZ5 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
TRIM42Q8IWZ5 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM42Q8IWZ5 AL032819.2-201ENST00000624543 2162 ntBASIC19.67■□□□□ 0.74
TRIM42Q8IWZ5 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM42Q8IWZ5 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM42Q8IWZ5 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM42Q8IWZ5 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.67■□□□□ 0.74
TRIM42Q8IWZ5 RBM17P2-201ENST00000616397 1405 ntBASIC19.67■□□□□ 0.74
TRIM42Q8IWZ5 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM42Q8IWZ5 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM42Q8IWZ5 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
TRIM42Q8IWZ5 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM42Q8IWZ5 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
TRIM42Q8IWZ5 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM42Q8IWZ5 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM42Q8IWZ5 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
TRIM42Q8IWZ5 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM42Q8IWZ5 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.66■□□□□ 0.74
TRIM42Q8IWZ5 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms