Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTL4Q6ZR62 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RTL4Q6ZR62 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RTL4Q6ZR62 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTL4Q6ZR62 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTL4Q6ZR62 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
RTL4Q6ZR62 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTL4Q6ZR62 AC128676.1-201ENST00000454392 318 ntBASIC18.53■□□□□ 0.56
RTL4Q6ZR62 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.53■□□□□ 0.56
RTL4Q6ZR62 AC005829.2-201ENST00000571422 1056 ntBASIC18.53■□□□□ 0.56
RTL4Q6ZR62 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.53■□□□□ 0.56
RTL4Q6ZR62 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.53■□□□□ 0.56
RTL4Q6ZR62 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTL4Q6ZR62 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.53■□□□□ 0.56
RTL4Q6ZR62 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.53■□□□□ 0.56
RTL4Q6ZR62 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTL4Q6ZR62 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
RTL4Q6ZR62 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.52■□□□□ 0.56
RTL4Q6ZR62 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
RTL4Q6ZR62 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
RTL4Q6ZR62 AL512408.1-201ENST00000569378 2000 ntBASIC18.52■□□□□ 0.56
RTL4Q6ZR62 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RTL4Q6ZR62 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
RTL4Q6ZR62 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RTL4Q6ZR62 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RTL4Q6ZR62 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
RTL4Q6ZR62 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.52■□□□□ 0.56
RTL4Q6ZR62 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RTL4Q6ZR62 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.52■□□□□ 0.56
RTL4Q6ZR62 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RTL4Q6ZR62 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.52■□□□□ 0.56
RTL4Q6ZR62 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.52■□□□□ 0.56
RTL4Q6ZR62 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RTL4Q6ZR62 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RTL4Q6ZR62 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.52■□□□□ 0.56
RTL4Q6ZR62 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
RTL4Q6ZR62 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
RTL4Q6ZR62 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
RTL4Q6ZR62 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.52■□□□□ 0.55
RTL4Q6ZR62 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RTL4Q6ZR62 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RTL4Q6ZR62 AC092720.2-201ENST00000602388 1665 ntBASIC18.51■□□□□ 0.55
RTL4Q6ZR62 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
RTL4Q6ZR62 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTL4Q6ZR62 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTL4Q6ZR62 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTL4Q6ZR62 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTL4Q6ZR62 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
RTL4Q6ZR62 KRT17P3-201ENST00000420566 1262 ntBASIC18.51■□□□□ 0.55
RTL4Q6ZR62 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.51■□□□□ 0.55
RTL4Q6ZR62 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RTL4Q6ZR62 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.51■□□□□ 0.55
RTL4Q6ZR62 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTL4Q6ZR62 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTL4Q6ZR62 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.51■□□□□ 0.55
RTL4Q6ZR62 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
RTL4Q6ZR62 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.51■□□□□ 0.55
RTL4Q6ZR62 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
RTL4Q6ZR62 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.5■□□□□ 0.55
RTL4Q6ZR62 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTL4Q6ZR62 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RTL4Q6ZR62 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTL4Q6ZR62 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.5■□□□□ 0.55
RTL4Q6ZR62 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTL4Q6ZR62 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.5■□□□□ 0.55
RTL4Q6ZR62 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTL4Q6ZR62 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.5■□□□□ 0.55
RTL4Q6ZR62 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.5■□□□□ 0.55
RTL4Q6ZR62 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTL4Q6ZR62 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTL4Q6ZR62 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.5■□□□□ 0.55
RTL4Q6ZR62 PRORSD1P-201ENST00000295112 541 ntBASIC18.5■□□□□ 0.55
RTL4Q6ZR62 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTL4Q6ZR62 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTL4Q6ZR62 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.5■□□□□ 0.55
RTL4Q6ZR62 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.5■□□□□ 0.55
RTL4Q6ZR62 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.5■□□□□ 0.55
RTL4Q6ZR62 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.5■□□□□ 0.55
RTL4Q6ZR62 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.5■□□□□ 0.55
RTL4Q6ZR62 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.5■□□□□ 0.55
RTL4Q6ZR62 AC008687.6-201ENST00000596318 630 ntBASIC18.5■□□□□ 0.55
RTL4Q6ZR62 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
RTL4Q6ZR62 AC073648.6-201ENST00000641589 218 ntBASIC18.5■□□□□ 0.55
RTL4Q6ZR62 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
RTL4Q6ZR62 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.5■□□□□ 0.55
RTL4Q6ZR62 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RTL4Q6ZR62 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RTL4Q6ZR62 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.5■□□□□ 0.55
RTL4Q6ZR62 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
RTL4Q6ZR62 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RTL4Q6ZR62 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
RTL4Q6ZR62 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
RTL4Q6ZR62 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTL4Q6ZR62 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTL4Q6ZR62 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTL4Q6ZR62 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.49■□□□□ 0.55
RTL4Q6ZR62 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
RTL4Q6ZR62 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTL4Q6ZR62 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTL4Q6ZR62 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms