Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXR1Q6PIV2 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXR1Q6PIV2 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXR1Q6PIV2 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXR1Q6PIV2 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXR1Q6PIV2 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXR1Q6PIV2 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.56■□□□□ 0.88
FOXR1Q6PIV2 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.56■□□□□ 0.88
FOXR1Q6PIV2 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.56■□□□□ 0.88
FOXR1Q6PIV2 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.56■□□□□ 0.88
FOXR1Q6PIV2 AC066615.1-201ENST00000640911 628 ntBASIC20.56■□□□□ 0.88
FOXR1Q6PIV2 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXR1Q6PIV2 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXR1Q6PIV2 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXR1Q6PIV2 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
FOXR1Q6PIV2 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.56■□□□□ 0.88
FOXR1Q6PIV2 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.56■□□□□ 0.88
FOXR1Q6PIV2 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXR1Q6PIV2 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
FOXR1Q6PIV2 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXR1Q6PIV2 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXR1Q6PIV2 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
FOXR1Q6PIV2 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
FOXR1Q6PIV2 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXR1Q6PIV2 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXR1Q6PIV2 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.56■□□□□ 0.88
FOXR1Q6PIV2 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.55■□□□□ 0.88
FOXR1Q6PIV2 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.55■□□□□ 0.88
FOXR1Q6PIV2 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.55■□□□□ 0.88
FOXR1Q6PIV2 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOXR1Q6PIV2 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
FOXR1Q6PIV2 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
FOXR1Q6PIV2 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOXR1Q6PIV2 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
FOXR1Q6PIV2 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOXR1Q6PIV2 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
FOXR1Q6PIV2 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
FOXR1Q6PIV2 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.55■□□□□ 0.88
FOXR1Q6PIV2 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.55■□□□□ 0.88
FOXR1Q6PIV2 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC20.55■□□□□ 0.88
FOXR1Q6PIV2 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.55■□□□□ 0.88
FOXR1Q6PIV2 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.55■□□□□ 0.88
FOXR1Q6PIV2 SLC7A5P2-201ENST00000553010 536 ntBASIC20.55■□□□□ 0.88
FOXR1Q6PIV2 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.55■□□□□ 0.88
FOXR1Q6PIV2 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.55■□□□□ 0.88
FOXR1Q6PIV2 AC106820.2-201ENST00000563775 3264 ntBASIC20.55■□□□□ 0.88
FOXR1Q6PIV2 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOXR1Q6PIV2 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOXR1Q6PIV2 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
FOXR1Q6PIV2 AP000997.3-201ENST00000623333 2250 ntBASIC20.55■□□□□ 0.88
FOXR1Q6PIV2 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOXR1Q6PIV2 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
FOXR1Q6PIV2 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOXR1Q6PIV2 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.54■□□□□ 0.88
FOXR1Q6PIV2 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
FOXR1Q6PIV2 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOXR1Q6PIV2 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.54■□□□□ 0.88
FOXR1Q6PIV2 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOXR1Q6PIV2 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.54■□□□□ 0.88
FOXR1Q6PIV2 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.54■□□□□ 0.88
FOXR1Q6PIV2 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
FOXR1Q6PIV2 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
FOXR1Q6PIV2 AC105036.2-201ENST00000569468 176 ntBASIC20.54■□□□□ 0.88
FOXR1Q6PIV2 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.54■□□□□ 0.88
FOXR1Q6PIV2 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOXR1Q6PIV2 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOXR1Q6PIV2 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.54■□□□□ 0.88
FOXR1Q6PIV2 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOXR1Q6PIV2 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOXR1Q6PIV2 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC20.54■□□□□ 0.88
FOXR1Q6PIV2 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOXR1Q6PIV2 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.54■□□□□ 0.88
FOXR1Q6PIV2 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
FOXR1Q6PIV2 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
FOXR1Q6PIV2 AL032819.2-201ENST00000624543 2162 ntBASIC20.53■□□□□ 0.88
FOXR1Q6PIV2 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
FOXR1Q6PIV2 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
FOXR1Q6PIV2 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FOXR1Q6PIV2 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FOXR1Q6PIV2 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
FOXR1Q6PIV2 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
FOXR1Q6PIV2 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
FOXR1Q6PIV2 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FOXR1Q6PIV2 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
FOXR1Q6PIV2 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
FOXR1Q6PIV2 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.53■□□□□ 0.88
FOXR1Q6PIV2 GUSBP6-202ENST00000438529 1198 ntBASIC20.53■□□□□ 0.88
FOXR1Q6PIV2 FAM201B-201ENST00000458407 597 ntBASIC20.53■□□□□ 0.88
FOXR1Q6PIV2 AF201337.1-201ENST00000520239 748 ntBASIC20.53■□□□□ 0.88
FOXR1Q6PIV2 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.53■□□□□ 0.88
FOXR1Q6PIV2 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.53■□□□□ 0.88
FOXR1Q6PIV2 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.53■□□□□ 0.88
FOXR1Q6PIV2 MIR4651-201ENST00000582622 73 ntBASIC20.53■□□□□ 0.88
FOXR1Q6PIV2 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.53■□□□□ 0.88
FOXR1Q6PIV2 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
FOXR1Q6PIV2 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.53■□□□□ 0.88
FOXR1Q6PIV2 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
FOXR1Q6PIV2 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
FOXR1Q6PIV2 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.52■□□□□ 0.88
FOXR1Q6PIV2 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms