Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CNKSR3Q6P9H4 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CNKSR3Q6P9H4 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
CNKSR3Q6P9H4 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.4■■□□□ 1.02
CNKSR3Q6P9H4 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
CNKSR3Q6P9H4 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
CNKSR3Q6P9H4 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC21.39■■□□□ 1.02
CNKSR3Q6P9H4 MED25-212ENST00000618715 1467 ntTSL 5 BASIC21.39■■□□□ 1.02
CNKSR3Q6P9H4 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CNKSR3Q6P9H4 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CNKSR3Q6P9H4 AC096733.2-201ENST00000609937 1394 ntBASIC21.39■■□□□ 1.02
CNKSR3Q6P9H4 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CNKSR3Q6P9H4 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.39■■□□□ 1.01
CNKSR3Q6P9H4 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
CNKSR3Q6P9H4 MFAP1P1-201ENST00000442257 1255 ntBASIC21.39■■□□□ 1.01
CNKSR3Q6P9H4 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
CNKSR3Q6P9H4 AC091390.4-202ENST00000476426 537 ntBASIC21.39■■□□□ 1.01
CNKSR3Q6P9H4 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CNKSR3Q6P9H4 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC21.39■■□□□ 1.01
CNKSR3Q6P9H4 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC21.39■■□□□ 1.01
CNKSR3Q6P9H4 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC21.39■■□□□ 1.01
CNKSR3Q6P9H4 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CNKSR3Q6P9H4 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
CNKSR3Q6P9H4 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CNKSR3Q6P9H4 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CNKSR3Q6P9H4 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CNKSR3Q6P9H4 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
CNKSR3Q6P9H4 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CNKSR3Q6P9H4 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CNKSR3Q6P9H4 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.38■■□□□ 1.01
CNKSR3Q6P9H4 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CNKSR3Q6P9H4 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.38■■□□□ 1.01
CNKSR3Q6P9H4 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CNKSR3Q6P9H4 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC21.38■■□□□ 1.01
CNKSR3Q6P9H4 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.38■■□□□ 1.01
CNKSR3Q6P9H4 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CNKSR3Q6P9H4 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CNKSR3Q6P9H4 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CNKSR3Q6P9H4 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CNKSR3Q6P9H4 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CNKSR3Q6P9H4 RNF152P1-201ENST00000397754 604 ntBASIC21.38■■□□□ 1.01
CNKSR3Q6P9H4 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CNKSR3Q6P9H4 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CNKSR3Q6P9H4 ISCU-203ENST00000431221 799 ntTSL 2 BASIC21.38■■□□□ 1.01
CNKSR3Q6P9H4 SAPCD2P2-201ENST00000431719 1174 ntBASIC21.38■■□□□ 1.01
CNKSR3Q6P9H4 PTPA-216ENST00000432651 857 ntTSL 2 BASIC21.38■■□□□ 1.01
CNKSR3Q6P9H4 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC21.38■■□□□ 1.01
CNKSR3Q6P9H4 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CNKSR3Q6P9H4 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC21.38■■□□□ 1.01
CNKSR3Q6P9H4 AC008040.2-201ENST00000461049 708 ntBASIC21.38■■□□□ 1.01
CNKSR3Q6P9H4 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC21.38■■□□□ 1.01
CNKSR3Q6P9H4 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC21.38■■□□□ 1.01
CNKSR3Q6P9H4 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC21.38■■□□□ 1.01
CNKSR3Q6P9H4 HLA-A-209ENST00000638375 975 ntBASIC21.38■■□□□ 1.01
CNKSR3Q6P9H4 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CNKSR3Q6P9H4 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CNKSR3Q6P9H4 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.38■■□□□ 1.01
CNKSR3Q6P9H4 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CNKSR3Q6P9H4 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.37■■□□□ 1.01
CNKSR3Q6P9H4 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CNKSR3Q6P9H4 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CNKSR3Q6P9H4 SLC25A1P2-201ENST00000430693 912 ntBASIC21.37■■□□□ 1.01
CNKSR3Q6P9H4 FAM207BP-201ENST00000447172 505 ntBASIC21.37■■□□□ 1.01
CNKSR3Q6P9H4 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
CNKSR3Q6P9H4 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC21.37■■□□□ 1.01
CNKSR3Q6P9H4 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CNKSR3Q6P9H4 AC139887.4-201ENST00000607877 719 ntBASIC21.37■■□□□ 1.01
CNKSR3Q6P9H4 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC21.37■■□□□ 1.01
CNKSR3Q6P9H4 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CNKSR3Q6P9H4 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CNKSR3Q6P9H4 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CNKSR3Q6P9H4 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CNKSR3Q6P9H4 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CNKSR3Q6P9H4 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CNKSR3Q6P9H4 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CNKSR3Q6P9H4 FP700111.2-201ENST00000619190 1892 ntBASIC21.37■■□□□ 1.01
CNKSR3Q6P9H4 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC21.36■■□□□ 1.01
CNKSR3Q6P9H4 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CNKSR3Q6P9H4 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CNKSR3Q6P9H4 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CNKSR3Q6P9H4 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.36■■□□□ 1.01
CNKSR3Q6P9H4 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CNKSR3Q6P9H4 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.36■■□□□ 1.01
CNKSR3Q6P9H4 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CNKSR3Q6P9H4 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CNKSR3Q6P9H4 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CNKSR3Q6P9H4 AL031133.1-201ENST00000406807 723 ntBASIC21.36■■□□□ 1.01
CNKSR3Q6P9H4 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC21.36■■□□□ 1.01
CNKSR3Q6P9H4 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CNKSR3Q6P9H4 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.36■■□□□ 1.01
CNKSR3Q6P9H4 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CNKSR3Q6P9H4 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.36■■□□□ 1.01
CNKSR3Q6P9H4 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CNKSR3Q6P9H4 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CNKSR3Q6P9H4 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CNKSR3Q6P9H4 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CNKSR3Q6P9H4 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CNKSR3Q6P9H4 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CNKSR3Q6P9H4 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CNKSR3Q6P9H4 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms