Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CASC4Q6P4E1 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.16■□□□□ 0.82
CASC4Q6P4E1 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CASC4Q6P4E1 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CASC4Q6P4E1 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CASC4Q6P4E1 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CASC4Q6P4E1 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CASC4Q6P4E1 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CASC4Q6P4E1 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.16■□□□□ 0.82
CASC4Q6P4E1 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CASC4Q6P4E1 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CASC4Q6P4E1 AL031963.3-201ENST00000606441 850 ntBASIC20.16■□□□□ 0.82
CASC4Q6P4E1 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.16■□□□□ 0.82
CASC4Q6P4E1 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.16■□□□□ 0.82
CASC4Q6P4E1 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.16■□□□□ 0.82
CASC4Q6P4E1 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
CASC4Q6P4E1 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CASC4Q6P4E1 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CASC4Q6P4E1 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.16■□□□□ 0.82
CASC4Q6P4E1 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CASC4Q6P4E1 KRT8P20-201ENST00000423953 1409 ntBASIC20.16■□□□□ 0.82
CASC4Q6P4E1 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CASC4Q6P4E1 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CASC4Q6P4E1 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.16■□□□□ 0.82
CASC4Q6P4E1 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CASC4Q6P4E1 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CASC4Q6P4E1 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.16■□□□□ 0.82
CASC4Q6P4E1 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CASC4Q6P4E1 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CASC4Q6P4E1 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
CASC4Q6P4E1 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CASC4Q6P4E1 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.15■□□□□ 0.82
CASC4Q6P4E1 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
CASC4Q6P4E1 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.15■□□□□ 0.82
CASC4Q6P4E1 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CASC4Q6P4E1 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CASC4Q6P4E1 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CASC4Q6P4E1 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
CASC4Q6P4E1 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CASC4Q6P4E1 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CASC4Q6P4E1 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CASC4Q6P4E1 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.15■□□□□ 0.82
CASC4Q6P4E1 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CASC4Q6P4E1 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.15■□□□□ 0.82
CASC4Q6P4E1 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CASC4Q6P4E1 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CASC4Q6P4E1 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CASC4Q6P4E1 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.14■□□□□ 0.81
CASC4Q6P4E1 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CASC4Q6P4E1 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CASC4Q6P4E1 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CASC4Q6P4E1 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CASC4Q6P4E1 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CASC4Q6P4E1 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.14■□□□□ 0.81
CASC4Q6P4E1 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CASC4Q6P4E1 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CASC4Q6P4E1 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CASC4Q6P4E1 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.14■□□□□ 0.81
CASC4Q6P4E1 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
CASC4Q6P4E1 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.14■□□□□ 0.81
CASC4Q6P4E1 AC022517.1-201ENST00000592429 346 ntBASIC20.14■□□□□ 0.81
CASC4Q6P4E1 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.14■□□□□ 0.81
CASC4Q6P4E1 AL589743.5-201ENST00000616611 1050 ntBASIC20.14■□□□□ 0.81
CASC4Q6P4E1 OR10C1-204ENST00000622521 1039 ntBASIC20.14■□□□□ 0.81
CASC4Q6P4E1 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CASC4Q6P4E1 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CASC4Q6P4E1 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.14■□□□□ 0.81
CASC4Q6P4E1 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CASC4Q6P4E1 AC020763.4-201ENST00000623414 4170 ntBASIC20.13■□□□□ 0.81
CASC4Q6P4E1 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.13■□□□□ 0.81
CASC4Q6P4E1 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CASC4Q6P4E1 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
CASC4Q6P4E1 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CASC4Q6P4E1 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CASC4Q6P4E1 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CASC4Q6P4E1 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
CASC4Q6P4E1 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CASC4Q6P4E1 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
CASC4Q6P4E1 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CASC4Q6P4E1 AC010980.2-201ENST00000587099 1412 ntBASIC20.13■□□□□ 0.81
CASC4Q6P4E1 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.13■□□□□ 0.81
CASC4Q6P4E1 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.13■□□□□ 0.81
CASC4Q6P4E1 AC087289.5-201ENST00000586076 3175 ntBASIC20.13■□□□□ 0.81
CASC4Q6P4E1 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CASC4Q6P4E1 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CASC4Q6P4E1 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.13■□□□□ 0.81
CASC4Q6P4E1 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CASC4Q6P4E1 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.13■□□□□ 0.81
CASC4Q6P4E1 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CASC4Q6P4E1 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CASC4Q6P4E1 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CASC4Q6P4E1 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CASC4Q6P4E1 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.13■□□□□ 0.81
CASC4Q6P4E1 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CASC4Q6P4E1 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CASC4Q6P4E1 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CASC4Q6P4E1 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.12■□□□□ 0.81
CASC4Q6P4E1 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.12■□□□□ 0.81
CASC4Q6P4E1 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.12■□□□□ 0.81
CASC4Q6P4E1 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms