Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RC3H1Q5TC82 YBX1P2-201ENST00000489612 999 ntBASIC25.1■■□□□ 1.61
RC3H1Q5TC82 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC25.1■■□□□ 1.61
RC3H1Q5TC82 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC25.1■■□□□ 1.61
RC3H1Q5TC82 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC25.1■■□□□ 1.61
RC3H1Q5TC82 WDR88-203ENST00000592765 651 ntTSL 5 BASIC25.1■■□□□ 1.61
RC3H1Q5TC82 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC25.1■■□□□ 1.61
RC3H1Q5TC82 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
RC3H1Q5TC82 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RC3H1Q5TC82 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RC3H1Q5TC82 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC25.1■■□□□ 1.61
RC3H1Q5TC82 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RC3H1Q5TC82 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RC3H1Q5TC82 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RC3H1Q5TC82 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RC3H1Q5TC82 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
RC3H1Q5TC82 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC25.09■■□□□ 1.61
RC3H1Q5TC82 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RC3H1Q5TC82 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
RC3H1Q5TC82 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RC3H1Q5TC82 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RC3H1Q5TC82 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
RC3H1Q5TC82 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RC3H1Q5TC82 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RC3H1Q5TC82 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC25.09■■□□□ 1.61
RC3H1Q5TC82 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
RC3H1Q5TC82 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
RC3H1Q5TC82 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC25.09■■□□□ 1.61
RC3H1Q5TC82 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
RC3H1Q5TC82 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RC3H1Q5TC82 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RC3H1Q5TC82 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
RC3H1Q5TC82 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RC3H1Q5TC82 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RC3H1Q5TC82 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
RC3H1Q5TC82 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
RC3H1Q5TC82 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
RC3H1Q5TC82 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RC3H1Q5TC82 DPP3P2-201ENST00000416030 1696 ntBASIC25.08■■□□□ 1.61
RC3H1Q5TC82 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RC3H1Q5TC82 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RC3H1Q5TC82 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RC3H1Q5TC82 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC25.08■■□□□ 1.61
RC3H1Q5TC82 AC007663.1-201ENST00000438948 1240 ntBASIC25.08■■□□□ 1.61
RC3H1Q5TC82 FAM207BP-201ENST00000447172 505 ntBASIC25.08■■□□□ 1.61
RC3H1Q5TC82 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC25.08■■□□□ 1.61
RC3H1Q5TC82 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
RC3H1Q5TC82 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC25.08■■□□□ 1.6
RC3H1Q5TC82 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RC3H1Q5TC82 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC25.07■■□□□ 1.6
RC3H1Q5TC82 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
RC3H1Q5TC82 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC25.07■■□□□ 1.6
RC3H1Q5TC82 AC092338.2-201ENST00000568827 1415 ntBASIC25.07■■□□□ 1.6
RC3H1Q5TC82 COX11P1-201ENST00000489116 835 ntBASIC25.07■■□□□ 1.6
RC3H1Q5TC82 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC25.07■■□□□ 1.6
RC3H1Q5TC82 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC25.07■■□□□ 1.6
RC3H1Q5TC82 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC25.07■■□□□ 1.6
RC3H1Q5TC82 AL023803.3-201ENST00000615559 522 ntBASIC25.07■■□□□ 1.6
RC3H1Q5TC82 AP000550.4-202ENST00000639755 178 ntBASIC25.07■■□□□ 1.6
RC3H1Q5TC82 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC25.07■■□□□ 1.6
RC3H1Q5TC82 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
RC3H1Q5TC82 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RC3H1Q5TC82 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
RC3H1Q5TC82 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RC3H1Q5TC82 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC25.06■■□□□ 1.6
RC3H1Q5TC82 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC25.06■■□□□ 1.6
RC3H1Q5TC82 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RC3H1Q5TC82 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RC3H1Q5TC82 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC25.06■■□□□ 1.6
RC3H1Q5TC82 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RC3H1Q5TC82 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC25.06■■□□□ 1.6
RC3H1Q5TC82 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RC3H1Q5TC82 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC25.06■■□□□ 1.6
RC3H1Q5TC82 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC25.06■■□□□ 1.6
RC3H1Q5TC82 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
RC3H1Q5TC82 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC25.06■■□□□ 1.6
RC3H1Q5TC82 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC25.06■■□□□ 1.6
RC3H1Q5TC82 MYB-221ENST00000527615 2381 ntTSL 5 BASIC25.06■■□□□ 1.6
RC3H1Q5TC82 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC25.06■■□□□ 1.6
RC3H1Q5TC82 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
RC3H1Q5TC82 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC25.05■■□□□ 1.6
RC3H1Q5TC82 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
RC3H1Q5TC82 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RC3H1Q5TC82 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC25.05■■□□□ 1.6
RC3H1Q5TC82 METTL23-204ENST00000586752 904 ntTSL 2 BASIC25.05■■□□□ 1.6
RC3H1Q5TC82 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
RC3H1Q5TC82 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
RC3H1Q5TC82 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RC3H1Q5TC82 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC25.04■■□□□ 1.6
RC3H1Q5TC82 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC25.04■■□□□ 1.6
RC3H1Q5TC82 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
RC3H1Q5TC82 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC25.04■■□□□ 1.6
RC3H1Q5TC82 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RC3H1Q5TC82 COPS8-203ENST00000409334 794 ntTSL 5 BASIC25.04■■□□□ 1.6
RC3H1Q5TC82 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RC3H1Q5TC82 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
RC3H1Q5TC82 TOLLIP-AS1-201ENST00000530897 939 ntBASIC25.04■■□□□ 1.6
RC3H1Q5TC82 DBP-204ENST00000599385 709 ntTSL 3 BASIC25.04■■□□□ 1.6
RC3H1Q5TC82 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC25.04■■□□□ 1.6
RC3H1Q5TC82 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC25.04■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms