Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.69■□□□□ 0.74
LDLRAP1Q5SW96 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LDLRAP1Q5SW96 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.69■□□□□ 0.74
LDLRAP1Q5SW96 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
LDLRAP1Q5SW96 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
LDLRAP1Q5SW96 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LDLRAP1Q5SW96 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.69■□□□□ 0.74
LDLRAP1Q5SW96 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
LDLRAP1Q5SW96 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LDLRAP1Q5SW96 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.69■□□□□ 0.74
LDLRAP1Q5SW96 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.69■□□□□ 0.74
LDLRAP1Q5SW96 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.69■□□□□ 0.74
LDLRAP1Q5SW96 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LDLRAP1Q5SW96 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LDLRAP1Q5SW96 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LDLRAP1Q5SW96 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LDLRAP1Q5SW96 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LDLRAP1Q5SW96 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
LDLRAP1Q5SW96 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
LDLRAP1Q5SW96 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LDLRAP1Q5SW96 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LDLRAP1Q5SW96 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.68■□□□□ 0.74
LDLRAP1Q5SW96 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LDLRAP1Q5SW96 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LDLRAP1Q5SW96 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LDLRAP1Q5SW96 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LDLRAP1Q5SW96 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.68■□□□□ 0.74
LDLRAP1Q5SW96 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
LDLRAP1Q5SW96 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LDLRAP1Q5SW96 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LDLRAP1Q5SW96 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LDLRAP1Q5SW96 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.68■□□□□ 0.74
LDLRAP1Q5SW96 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.68■□□□□ 0.74
LDLRAP1Q5SW96 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
LDLRAP1Q5SW96 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LDLRAP1Q5SW96 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LDLRAP1Q5SW96 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LDLRAP1Q5SW96 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
LDLRAP1Q5SW96 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LDLRAP1Q5SW96 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LDLRAP1Q5SW96 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LDLRAP1Q5SW96 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.67■□□□□ 0.74
LDLRAP1Q5SW96 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
LDLRAP1Q5SW96 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LDLRAP1Q5SW96 AC099778.1-201ENST00000568593 1911 ntBASIC19.67■□□□□ 0.74
LDLRAP1Q5SW96 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LDLRAP1Q5SW96 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LDLRAP1Q5SW96 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LDLRAP1Q5SW96 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.67■□□□□ 0.74
LDLRAP1Q5SW96 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.67■□□□□ 0.74
LDLRAP1Q5SW96 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LDLRAP1Q5SW96 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LDLRAP1Q5SW96 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.67■□□□□ 0.74
LDLRAP1Q5SW96 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
LDLRAP1Q5SW96 AC006058.3-201ENST00000606217 1069 ntBASIC19.67■□□□□ 0.74
LDLRAP1Q5SW96 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LDLRAP1Q5SW96 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LDLRAP1Q5SW96 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LDLRAP1Q5SW96 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LDLRAP1Q5SW96 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
LDLRAP1Q5SW96 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.67■□□□□ 0.74
LDLRAP1Q5SW96 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LDLRAP1Q5SW96 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LDLRAP1Q5SW96 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
LDLRAP1Q5SW96 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LDLRAP1Q5SW96 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.67■□□□□ 0.74
LDLRAP1Q5SW96 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
LDLRAP1Q5SW96 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.66■□□□□ 0.74
LDLRAP1Q5SW96 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LDLRAP1Q5SW96 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LDLRAP1Q5SW96 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
LDLRAP1Q5SW96 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.66■□□□□ 0.74
LDLRAP1Q5SW96 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.66■□□□□ 0.74
LDLRAP1Q5SW96 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.66■□□□□ 0.74
LDLRAP1Q5SW96 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
LDLRAP1Q5SW96 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LDLRAP1Q5SW96 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LDLRAP1Q5SW96 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.66■□□□□ 0.74
LDLRAP1Q5SW96 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.66■□□□□ 0.74
LDLRAP1Q5SW96 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.66■□□□□ 0.74
LDLRAP1Q5SW96 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LDLRAP1Q5SW96 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LDLRAP1Q5SW96 AL121906.2-201ENST00000621597 723 ntBASIC19.66■□□□□ 0.74
LDLRAP1Q5SW96 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
LDLRAP1Q5SW96 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LDLRAP1Q5SW96 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
LDLRAP1Q5SW96 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LDLRAP1Q5SW96 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LDLRAP1Q5SW96 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.66■□□□□ 0.74
LDLRAP1Q5SW96 PHGDH-210ENST00000641115 1638 ntBASIC19.65■□□□□ 0.74
LDLRAP1Q5SW96 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.65■□□□□ 0.74
LDLRAP1Q5SW96 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LDLRAP1Q5SW96 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.65■□□□□ 0.74
LDLRAP1Q5SW96 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
LDLRAP1Q5SW96 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.65■□□□□ 0.74
LDLRAP1Q5SW96 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.65■□□□□ 0.74
LDLRAP1Q5SW96 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
LDLRAP1Q5SW96 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.65■□□□□ 0.74
LDLRAP1Q5SW96 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LDLRAP1Q5SW96 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms