Protein–RNA interactions for Protein: Q5JTY5

CBWD3, COBW domain-containing protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3Q5JTY5 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
CBWD3Q5JTY5 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CBWD3Q5JTY5 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.42■■□□□ 1.02
CBWD3Q5JTY5 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
CBWD3Q5JTY5 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
CBWD3Q5JTY5 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.42■■□□□ 1.02
CBWD3Q5JTY5 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.42■■□□□ 1.02
CBWD3Q5JTY5 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.42■■□□□ 1.02
CBWD3Q5JTY5 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.42■■□□□ 1.02
CBWD3Q5JTY5 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
CBWD3Q5JTY5 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.42■■□□□ 1.02
CBWD3Q5JTY5 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
CBWD3Q5JTY5 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.42■■□□□ 1.02
CBWD3Q5JTY5 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.42■■□□□ 1.02
CBWD3Q5JTY5 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.42■■□□□ 1.02
CBWD3Q5JTY5 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CBWD3Q5JTY5 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CBWD3Q5JTY5 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CBWD3Q5JTY5 AC116351.2-201ENST00000606540 1585 ntBASIC21.41■■□□□ 1.02
CBWD3Q5JTY5 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CBWD3Q5JTY5 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.41■■□□□ 1.02
CBWD3Q5JTY5 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CBWD3Q5JTY5 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.41■■□□□ 1.02
CBWD3Q5JTY5 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.41■■□□□ 1.02
CBWD3Q5JTY5 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.41■■□□□ 1.02
CBWD3Q5JTY5 KLF2-202ENST00000592003 564 ntTSL 3 BASIC21.41■■□□□ 1.02
CBWD3Q5JTY5 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.41■■□□□ 1.02
CBWD3Q5JTY5 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.41■■□□□ 1.02
CBWD3Q5JTY5 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
CBWD3Q5JTY5 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CBWD3Q5JTY5 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
CBWD3Q5JTY5 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
CBWD3Q5JTY5 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.4■■□□□ 1.02
CBWD3Q5JTY5 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.4■■□□□ 1.02
CBWD3Q5JTY5 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CBWD3Q5JTY5 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CBWD3Q5JTY5 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CBWD3Q5JTY5 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
CBWD3Q5JTY5 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CBWD3Q5JTY5 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CBWD3Q5JTY5 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CBWD3Q5JTY5 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CBWD3Q5JTY5 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
CBWD3Q5JTY5 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
CBWD3Q5JTY5 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CBWD3Q5JTY5 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CBWD3Q5JTY5 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CBWD3Q5JTY5 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CBWD3Q5JTY5 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.39■■□□□ 1.02
CBWD3Q5JTY5 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CBWD3Q5JTY5 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CBWD3Q5JTY5 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CBWD3Q5JTY5 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CBWD3Q5JTY5 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CBWD3Q5JTY5 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CBWD3Q5JTY5 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CBWD3Q5JTY5 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.39■■□□□ 1.01
CBWD3Q5JTY5 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
CBWD3Q5JTY5 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
CBWD3Q5JTY5 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.39■■□□□ 1.01
CBWD3Q5JTY5 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.39■■□□□ 1.01
CBWD3Q5JTY5 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CBWD3Q5JTY5 POLI-202ENST00000406285 2030 ntTSL 2 BASIC21.39■■□□□ 1.01
CBWD3Q5JTY5 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CBWD3Q5JTY5 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
CBWD3Q5JTY5 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.39■■□□□ 1.01
CBWD3Q5JTY5 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
CBWD3Q5JTY5 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.39■■□□□ 1.01
CBWD3Q5JTY5 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
CBWD3Q5JTY5 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CBWD3Q5JTY5 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CBWD3Q5JTY5 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CBWD3Q5JTY5 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.38■■□□□ 1.01
CBWD3Q5JTY5 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.38■■□□□ 1.01
CBWD3Q5JTY5 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CBWD3Q5JTY5 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
CBWD3Q5JTY5 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CBWD3Q5JTY5 RPS2P52-201ENST00000469610 820 ntBASIC21.38■■□□□ 1.01
CBWD3Q5JTY5 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
CBWD3Q5JTY5 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.38■■□□□ 1.01
CBWD3Q5JTY5 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.38■■□□□ 1.01
CBWD3Q5JTY5 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.38■■□□□ 1.01
CBWD3Q5JTY5 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.38■■□□□ 1.01
CBWD3Q5JTY5 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CBWD3Q5JTY5 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CBWD3Q5JTY5 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CBWD3Q5JTY5 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.38■■□□□ 1.01
CBWD3Q5JTY5 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CBWD3Q5JTY5 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CBWD3Q5JTY5 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CBWD3Q5JTY5 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CBWD3Q5JTY5 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CBWD3Q5JTY5 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CBWD3Q5JTY5 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CBWD3Q5JTY5 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
CBWD3Q5JTY5 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CBWD3Q5JTY5 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CBWD3Q5JTY5 TFP1-202ENST00000475455 1573 ntBASIC21.37■■□□□ 1.01
CBWD3Q5JTY5 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CBWD3Q5JTY5 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms