Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
ATP13A4Q4VNC1 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ATP13A4Q4VNC1 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.64■□□□□ 0.89
ATP13A4Q4VNC1 PHGDH-210ENST00000641115 1638 ntBASIC20.64■□□□□ 0.89
ATP13A4Q4VNC1 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP13A4Q4VNC1 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.63■□□□□ 0.89
ATP13A4Q4VNC1 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATP13A4Q4VNC1 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP13A4Q4VNC1 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.63■□□□□ 0.89
ATP13A4Q4VNC1 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.63■□□□□ 0.89
ATP13A4Q4VNC1 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATP13A4Q4VNC1 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
ATP13A4Q4VNC1 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP13A4Q4VNC1 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.63■□□□□ 0.89
ATP13A4Q4VNC1 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.63■□□□□ 0.89
ATP13A4Q4VNC1 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.63■□□□□ 0.89
ATP13A4Q4VNC1 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.63■□□□□ 0.89
ATP13A4Q4VNC1 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.63■□□□□ 0.89
ATP13A4Q4VNC1 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.63■□□□□ 0.89
ATP13A4Q4VNC1 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
ATP13A4Q4VNC1 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATP13A4Q4VNC1 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATP13A4Q4VNC1 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP13A4Q4VNC1 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP13A4Q4VNC1 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
ATP13A4Q4VNC1 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
ATP13A4Q4VNC1 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP13A4Q4VNC1 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATP13A4Q4VNC1 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.63■□□□□ 0.89
ATP13A4Q4VNC1 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP13A4Q4VNC1 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ATP13A4Q4VNC1 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP13A4Q4VNC1 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP13A4Q4VNC1 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP13A4Q4VNC1 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.62■□□□□ 0.89
ATP13A4Q4VNC1 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.62■□□□□ 0.89
ATP13A4Q4VNC1 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ATP13A4Q4VNC1 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
ATP13A4Q4VNC1 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.62■□□□□ 0.89
ATP13A4Q4VNC1 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
ATP13A4Q4VNC1 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.62■□□□□ 0.89
ATP13A4Q4VNC1 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.62■□□□□ 0.89
ATP13A4Q4VNC1 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP13A4Q4VNC1 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.61■□□□□ 0.89
ATP13A4Q4VNC1 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.61■□□□□ 0.89
ATP13A4Q4VNC1 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP13A4Q4VNC1 AC087289.5-201ENST00000586076 3175 ntBASIC20.61■□□□□ 0.89
ATP13A4Q4VNC1 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
ATP13A4Q4VNC1 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.61■□□□□ 0.89
ATP13A4Q4VNC1 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.61■□□□□ 0.89
ATP13A4Q4VNC1 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.61■□□□□ 0.89
ATP13A4Q4VNC1 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
ATP13A4Q4VNC1 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP13A4Q4VNC1 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.61■□□□□ 0.89
ATP13A4Q4VNC1 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ATP13A4Q4VNC1 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.61■□□□□ 0.89
ATP13A4Q4VNC1 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP13A4Q4VNC1 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
ATP13A4Q4VNC1 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.61■□□□□ 0.89
ATP13A4Q4VNC1 AC091874.3-201ENST00000512672 1195 ntBASIC20.61■□□□□ 0.89
ATP13A4Q4VNC1 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.61■□□□□ 0.89
ATP13A4Q4VNC1 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.61■□□□□ 0.89
ATP13A4Q4VNC1 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP13A4Q4VNC1 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP13A4Q4VNC1 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP13A4Q4VNC1 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP13A4Q4VNC1 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.61■□□□□ 0.89
ATP13A4Q4VNC1 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ATP13A4Q4VNC1 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
ATP13A4Q4VNC1 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
ATP13A4Q4VNC1 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP13A4Q4VNC1 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ATP13A4Q4VNC1 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP13A4Q4VNC1 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
ATP13A4Q4VNC1 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP13A4Q4VNC1 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
ATP13A4Q4VNC1 AP001271.2-201ENST00000624018 1556 ntBASIC20.6■□□□□ 0.89
ATP13A4Q4VNC1 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
ATP13A4Q4VNC1 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
ATP13A4Q4VNC1 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP13A4Q4VNC1 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP13A4Q4VNC1 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.6■□□□□ 0.89
ATP13A4Q4VNC1 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATP13A4Q4VNC1 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
ATP13A4Q4VNC1 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
ATP13A4Q4VNC1 AC098934.4-201ENST00000564127 592 ntBASIC20.6■□□□□ 0.89
ATP13A4Q4VNC1 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.6■□□□□ 0.89
ATP13A4Q4VNC1 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.6■□□□□ 0.89
ATP13A4Q4VNC1 AC092118.2-201ENST00000613495 667 ntBASIC20.6■□□□□ 0.89
ATP13A4Q4VNC1 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.6■□□□□ 0.89
ATP13A4Q4VNC1 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.6■□□□□ 0.89
ATP13A4Q4VNC1 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP13A4Q4VNC1 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.6■□□□□ 0.89
ATP13A4Q4VNC1 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP13A4Q4VNC1 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
ATP13A4Q4VNC1 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.6■□□□□ 0.89
ATP13A4Q4VNC1 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ATP13A4Q4VNC1 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
ATP13A4Q4VNC1 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ATP13A4Q4VNC1 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms