Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC22.99■■□□□ 1.27
CCDC144BQ3MJ40 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC22.99■■□□□ 1.27
CCDC144BQ3MJ40 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC22.99■■□□□ 1.27
CCDC144BQ3MJ40 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC22.99■■□□□ 1.27
CCDC144BQ3MJ40 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CCDC144BQ3MJ40 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CCDC144BQ3MJ40 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CCDC144BQ3MJ40 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
CCDC144BQ3MJ40 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC22.99■■□□□ 1.27
CCDC144BQ3MJ40 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
CCDC144BQ3MJ40 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CCDC144BQ3MJ40 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC22.99■■□□□ 1.27
CCDC144BQ3MJ40 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
CCDC144BQ3MJ40 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
CCDC144BQ3MJ40 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC22.99■■□□□ 1.27
CCDC144BQ3MJ40 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CCDC144BQ3MJ40 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC22.99■■□□□ 1.27
CCDC144BQ3MJ40 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CCDC144BQ3MJ40 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
CCDC144BQ3MJ40 AL162377.1-201ENST00000618844 1793 ntBASIC22.99■■□□□ 1.27
CCDC144BQ3MJ40 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CCDC144BQ3MJ40 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CCDC144BQ3MJ40 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC22.98■■□□□ 1.27
CCDC144BQ3MJ40 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC22.98■■□□□ 1.27
CCDC144BQ3MJ40 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC144BQ3MJ40 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
CCDC144BQ3MJ40 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC144BQ3MJ40 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC22.98■■□□□ 1.27
CCDC144BQ3MJ40 KRASP1-201ENST00000407852 552 ntBASIC22.98■■□□□ 1.27
CCDC144BQ3MJ40 AL390719.1-204ENST00000412397 1219 ntBASIC22.98■■□□□ 1.27
CCDC144BQ3MJ40 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC144BQ3MJ40 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC22.98■■□□□ 1.27
CCDC144BQ3MJ40 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC22.98■■□□□ 1.27
CCDC144BQ3MJ40 AC110285.5-201ENST00000611501 352 ntBASIC22.98■■□□□ 1.27
CCDC144BQ3MJ40 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC144BQ3MJ40 AC007225.1-201ENST00000566331 1836 ntBASIC22.98■■□□□ 1.27
CCDC144BQ3MJ40 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC144BQ3MJ40 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
CCDC144BQ3MJ40 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC22.97■■□□□ 1.27
CCDC144BQ3MJ40 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CCDC144BQ3MJ40 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
CCDC144BQ3MJ40 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CCDC144BQ3MJ40 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
CCDC144BQ3MJ40 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC22.97■■□□□ 1.27
CCDC144BQ3MJ40 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC22.97■■□□□ 1.27
CCDC144BQ3MJ40 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC22.97■■□□□ 1.27
CCDC144BQ3MJ40 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC22.97■■□□□ 1.27
CCDC144BQ3MJ40 AL049637.2-201ENST00000641778 930 ntBASIC22.97■■□□□ 1.27
CCDC144BQ3MJ40 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CCDC144BQ3MJ40 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CCDC144BQ3MJ40 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
CCDC144BQ3MJ40 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CCDC144BQ3MJ40 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC22.97■■□□□ 1.27
CCDC144BQ3MJ40 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC22.97■■□□□ 1.27
CCDC144BQ3MJ40 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CCDC144BQ3MJ40 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CCDC144BQ3MJ40 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
CCDC144BQ3MJ40 RER1-204ENST00000378518 522 ntTSL 3 BASIC22.96■■□□□ 1.27
CCDC144BQ3MJ40 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC22.96■■□□□ 1.27
CCDC144BQ3MJ40 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
CCDC144BQ3MJ40 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC22.96■■□□□ 1.27
CCDC144BQ3MJ40 RPS20-210ENST00000523936 899 ntTSL 2 BASIC22.96■■□□□ 1.27
CCDC144BQ3MJ40 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC22.96■■□□□ 1.27
CCDC144BQ3MJ40 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
CCDC144BQ3MJ40 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
CCDC144BQ3MJ40 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CCDC144BQ3MJ40 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CCDC144BQ3MJ40 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC22.96■■□□□ 1.27
CCDC144BQ3MJ40 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC22.96■■□□□ 1.27
CCDC144BQ3MJ40 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CCDC144BQ3MJ40 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC22.96■■□□□ 1.27
CCDC144BQ3MJ40 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CCDC144BQ3MJ40 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CCDC144BQ3MJ40 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CCDC144BQ3MJ40 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC22.95■■□□□ 1.27
CCDC144BQ3MJ40 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CCDC144BQ3MJ40 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CCDC144BQ3MJ40 KRT17P2-201ENST00000300992 1314 ntBASIC22.95■■□□□ 1.26
CCDC144BQ3MJ40 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CCDC144BQ3MJ40 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CCDC144BQ3MJ40 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
CCDC144BQ3MJ40 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CCDC144BQ3MJ40 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
CCDC144BQ3MJ40 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CCDC144BQ3MJ40 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
CCDC144BQ3MJ40 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC22.95■■□□□ 1.26
CCDC144BQ3MJ40 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC22.95■■□□□ 1.26
CCDC144BQ3MJ40 BX088651.1-201ENST00000540551 451 ntBASIC22.95■■□□□ 1.26
CCDC144BQ3MJ40 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC22.95■■□□□ 1.26
CCDC144BQ3MJ40 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
CCDC144BQ3MJ40 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
CCDC144BQ3MJ40 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CCDC144BQ3MJ40 AC121338.2-201ENST00000622535 1744 ntBASIC22.95■■□□□ 1.26
CCDC144BQ3MJ40 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CCDC144BQ3MJ40 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CCDC144BQ3MJ40 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC22.94■■□□□ 1.26
CCDC144BQ3MJ40 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
CCDC144BQ3MJ40 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC22.94■■□□□ 1.26
CCDC144BQ3MJ40 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC22.94■■□□□ 1.26
CCDC144BQ3MJ40 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC22.94■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms