Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ERCC6LQ2NKX8 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.95■□□□□ 0.94
ERCC6LQ2NKX8 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ERCC6LQ2NKX8 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ERCC6LQ2NKX8 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ERCC6LQ2NKX8 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
ERCC6LQ2NKX8 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ERCC6LQ2NKX8 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
ERCC6LQ2NKX8 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
ERCC6LQ2NKX8 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ERCC6LQ2NKX8 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ERCC6LQ2NKX8 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ERCC6LQ2NKX8 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.94■□□□□ 0.94
ERCC6LQ2NKX8 AC053503.5-201ENST00000601508 636 ntBASIC20.94■□□□□ 0.94
ERCC6LQ2NKX8 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
ERCC6LQ2NKX8 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.94■□□□□ 0.94
ERCC6LQ2NKX8 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.94■□□□□ 0.94
ERCC6LQ2NKX8 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ERCC6LQ2NKX8 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ERCC6LQ2NKX8 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ERCC6LQ2NKX8 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.94■□□□□ 0.94
ERCC6LQ2NKX8 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ERCC6LQ2NKX8 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ERCC6LQ2NKX8 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ERCC6LQ2NKX8 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ERCC6LQ2NKX8 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ERCC6LQ2NKX8 KRT8P36-201ENST00000489121 1440 ntBASIC20.94■□□□□ 0.94
ERCC6LQ2NKX8 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
ERCC6LQ2NKX8 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.94■□□□□ 0.94
ERCC6LQ2NKX8 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
ERCC6LQ2NKX8 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC20.93■□□□□ 0.94
ERCC6LQ2NKX8 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ERCC6LQ2NKX8 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
ERCC6LQ2NKX8 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
ERCC6LQ2NKX8 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ERCC6LQ2NKX8 AC068880.1-201ENST00000507289 2297 ntBASIC20.93■□□□□ 0.94
ERCC6LQ2NKX8 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ERCC6LQ2NKX8 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ERCC6LQ2NKX8 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ERCC6LQ2NKX8 SERBP1P1-201ENST00000396021 1160 ntBASIC20.93■□□□□ 0.94
ERCC6LQ2NKX8 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ERCC6LQ2NKX8 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.93■□□□□ 0.94
ERCC6LQ2NKX8 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.93■□□□□ 0.94
ERCC6LQ2NKX8 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ERCC6LQ2NKX8 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ERCC6LQ2NKX8 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
ERCC6LQ2NKX8 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ERCC6LQ2NKX8 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ERCC6LQ2NKX8 AC009237.14-201ENST00000609975 1594 ntBASIC20.93■□□□□ 0.94
ERCC6LQ2NKX8 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.93■□□□□ 0.94
ERCC6LQ2NKX8 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.93■□□□□ 0.94
ERCC6LQ2NKX8 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
ERCC6LQ2NKX8 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ERCC6LQ2NKX8 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ERCC6LQ2NKX8 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ERCC6LQ2NKX8 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ERCC6LQ2NKX8 NOC2LP2-201ENST00000407594 1944 ntBASIC20.92■□□□□ 0.94
ERCC6LQ2NKX8 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC20.92■□□□□ 0.94
ERCC6LQ2NKX8 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ERCC6LQ2NKX8 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ERCC6LQ2NKX8 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
ERCC6LQ2NKX8 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.92■□□□□ 0.94
ERCC6LQ2NKX8 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ERCC6LQ2NKX8 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ERCC6LQ2NKX8 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
ERCC6LQ2NKX8 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.92■□□□□ 0.94
ERCC6LQ2NKX8 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ERCC6LQ2NKX8 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ERCC6LQ2NKX8 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ERCC6LQ2NKX8 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ERCC6LQ2NKX8 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.92■□□□□ 0.94
ERCC6LQ2NKX8 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ERCC6LQ2NKX8 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.92■□□□□ 0.94
ERCC6LQ2NKX8 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
ERCC6LQ2NKX8 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ERCC6LQ2NKX8 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ERCC6LQ2NKX8 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ERCC6LQ2NKX8 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ERCC6LQ2NKX8 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.91■□□□□ 0.94
ERCC6LQ2NKX8 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ERCC6LQ2NKX8 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
ERCC6LQ2NKX8 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ERCC6LQ2NKX8 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ERCC6LQ2NKX8 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ERCC6LQ2NKX8 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ERCC6LQ2NKX8 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.91■□□□□ 0.94
ERCC6LQ2NKX8 AC133561.4-201ENST00000566112 224 ntBASIC20.91■□□□□ 0.94
ERCC6LQ2NKX8 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ERCC6LQ2NKX8 AC006333.2-201ENST00000607957 2099 ntBASIC20.91■□□□□ 0.94
ERCC6LQ2NKX8 AC090164.3-201ENST00000610780 2143 ntBASIC20.91■□□□□ 0.94
ERCC6LQ2NKX8 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ERCC6LQ2NKX8 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC20.91■□□□□ 0.94
ERCC6LQ2NKX8 AC136469.2-201ENST00000623944 1028 ntBASIC20.91■□□□□ 0.94
ERCC6LQ2NKX8 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.91■□□□□ 0.94
ERCC6LQ2NKX8 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.91■□□□□ 0.94
ERCC6LQ2NKX8 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ERCC6LQ2NKX8 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ERCC6LQ2NKX8 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.91■□□□□ 0.94
ERCC6LQ2NKX8 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ERCC6LQ2NKX8 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms