Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CTC1Q2NKJ3 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
CTC1Q2NKJ3 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CTC1Q2NKJ3 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CTC1Q2NKJ3 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC21.21■□□□□ 0.99
CTC1Q2NKJ3 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.21■□□□□ 0.99
CTC1Q2NKJ3 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC21.21■□□□□ 0.99
CTC1Q2NKJ3 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC21.21■□□□□ 0.99
CTC1Q2NKJ3 AL121906.2-201ENST00000621597 723 ntBASIC21.21■□□□□ 0.99
CTC1Q2NKJ3 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CTC1Q2NKJ3 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CTC1Q2NKJ3 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CTC1Q2NKJ3 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.2■□□□□ 0.99
CTC1Q2NKJ3 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CTC1Q2NKJ3 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CTC1Q2NKJ3 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CTC1Q2NKJ3 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CTC1Q2NKJ3 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC21.2■□□□□ 0.98
CTC1Q2NKJ3 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CTC1Q2NKJ3 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC21.2■□□□□ 0.98
CTC1Q2NKJ3 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC21.2■□□□□ 0.98
CTC1Q2NKJ3 WWOX-216ENST00000569818 525 ntBASIC21.2■□□□□ 0.98
CTC1Q2NKJ3 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.2■□□□□ 0.98
CTC1Q2NKJ3 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CTC1Q2NKJ3 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CTC1Q2NKJ3 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
CTC1Q2NKJ3 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC21.19■□□□□ 0.98
CTC1Q2NKJ3 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CTC1Q2NKJ3 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CTC1Q2NKJ3 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CTC1Q2NKJ3 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC21.19■□□□□ 0.98
CTC1Q2NKJ3 KSR1P1-201ENST00000446298 240 ntBASIC21.19■□□□□ 0.98
CTC1Q2NKJ3 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CTC1Q2NKJ3 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.19■□□□□ 0.98
CTC1Q2NKJ3 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.19■□□□□ 0.98
CTC1Q2NKJ3 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC21.19■□□□□ 0.98
CTC1Q2NKJ3 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CTC1Q2NKJ3 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
CTC1Q2NKJ3 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CTC1Q2NKJ3 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.19■□□□□ 0.98
CTC1Q2NKJ3 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CTC1Q2NKJ3 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CTC1Q2NKJ3 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CTC1Q2NKJ3 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CTC1Q2NKJ3 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CTC1Q2NKJ3 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CTC1Q2NKJ3 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CTC1Q2NKJ3 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.18■□□□□ 0.98
CTC1Q2NKJ3 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC21.18■□□□□ 0.98
CTC1Q2NKJ3 AC010203.1-204ENST00000548782 407 ntBASIC21.18■□□□□ 0.98
CTC1Q2NKJ3 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC21.18■□□□□ 0.98
CTC1Q2NKJ3 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CTC1Q2NKJ3 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CTC1Q2NKJ3 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CTC1Q2NKJ3 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CTC1Q2NKJ3 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CTC1Q2NKJ3 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CTC1Q2NKJ3 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.17■□□□□ 0.98
CTC1Q2NKJ3 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.17■□□□□ 0.98
CTC1Q2NKJ3 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CTC1Q2NKJ3 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CTC1Q2NKJ3 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.17■□□□□ 0.98
CTC1Q2NKJ3 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CTC1Q2NKJ3 NIFKP9-201ENST00000419265 221 ntBASIC21.17■□□□□ 0.98
CTC1Q2NKJ3 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC21.17■□□□□ 0.98
CTC1Q2NKJ3 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC21.17■□□□□ 0.98
CTC1Q2NKJ3 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.17■□□□□ 0.98
CTC1Q2NKJ3 AC006011.2-201ENST00000621313 1158 ntBASIC21.17■□□□□ 0.98
CTC1Q2NKJ3 CR392000.1-201ENST00000624770 1228 ntBASIC21.17■□□□□ 0.98
CTC1Q2NKJ3 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CTC1Q2NKJ3 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CTC1Q2NKJ3 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CTC1Q2NKJ3 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CTC1Q2NKJ3 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.17■□□□□ 0.98
CTC1Q2NKJ3 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CTC1Q2NKJ3 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CTC1Q2NKJ3 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.16■□□□□ 0.98
CTC1Q2NKJ3 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CTC1Q2NKJ3 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CTC1Q2NKJ3 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CTC1Q2NKJ3 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CTC1Q2NKJ3 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.16■□□□□ 0.98
CTC1Q2NKJ3 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CTC1Q2NKJ3 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CTC1Q2NKJ3 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC21.16■□□□□ 0.98
CTC1Q2NKJ3 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CTC1Q2NKJ3 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CTC1Q2NKJ3 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CTC1Q2NKJ3 USF2-205ENST00000594064 1179 ntTSL 2 BASIC21.16■□□□□ 0.98
CTC1Q2NKJ3 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC21.16■□□□□ 0.98
CTC1Q2NKJ3 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
CTC1Q2NKJ3 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CTC1Q2NKJ3 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
CTC1Q2NKJ3 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.15■□□□□ 0.98
CTC1Q2NKJ3 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CTC1Q2NKJ3 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CTC1Q2NKJ3 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CTC1Q2NKJ3 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CTC1Q2NKJ3 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CTC1Q2NKJ3 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms