Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AP001271.2-201ENST00000624018 1556 ntBASIC24.03■■□□□ 1.44
RFX7Q2KHR2 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC24.03■■□□□ 1.44
RFX7Q2KHR2 ADM-207ENST00000530439 1839 ntTSL 2 BASIC24.03■■□□□ 1.44
RFX7Q2KHR2 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RFX7Q2KHR2 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
RFX7Q2KHR2 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
RFX7Q2KHR2 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC24.03■■□□□ 1.44
RFX7Q2KHR2 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RFX7Q2KHR2 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
RFX7Q2KHR2 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC24.03■■□□□ 1.44
RFX7Q2KHR2 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC24.03■■□□□ 1.44
RFX7Q2KHR2 MAX-217ENST00000557277 728 ntTSL 3 BASIC24.03■■□□□ 1.44
RFX7Q2KHR2 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC24.03■■□□□ 1.44
RFX7Q2KHR2 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC24.03■■□□□ 1.44
RFX7Q2KHR2 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC24.02■■□□□ 1.44
RFX7Q2KHR2 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
RFX7Q2KHR2 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RFX7Q2KHR2 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC24.02■■□□□ 1.44
RFX7Q2KHR2 AC009237.14-201ENST00000609975 1594 ntBASIC24.02■■□□□ 1.44
RFX7Q2KHR2 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RFX7Q2KHR2 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
RFX7Q2KHR2 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RFX7Q2KHR2 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
RFX7Q2KHR2 TMEM179-206ENST00000616017 1645 ntBASIC24.02■■□□□ 1.44
RFX7Q2KHR2 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
RFX7Q2KHR2 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
RFX7Q2KHR2 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
RFX7Q2KHR2 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
RFX7Q2KHR2 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC24.02■■□□□ 1.44
RFX7Q2KHR2 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC24.02■■□□□ 1.44
RFX7Q2KHR2 AL121829.2-201ENST00000620908 328 ntBASIC24.02■■□□□ 1.44
RFX7Q2KHR2 AL391422.3-201ENST00000603791 2761 ntBASIC24.02■■□□□ 1.44
RFX7Q2KHR2 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
RFX7Q2KHR2 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
RFX7Q2KHR2 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC24.02■■□□□ 1.44
RFX7Q2KHR2 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
RFX7Q2KHR2 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC24.01■■□□□ 1.43
RFX7Q2KHR2 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC24.01■■□□□ 1.43
RFX7Q2KHR2 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
RFX7Q2KHR2 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
RFX7Q2KHR2 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
RFX7Q2KHR2 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC24.01■■□□□ 1.43
RFX7Q2KHR2 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC24.01■■□□□ 1.43
RFX7Q2KHR2 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
RFX7Q2KHR2 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC24.01■■□□□ 1.43
RFX7Q2KHR2 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
RFX7Q2KHR2 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
RFX7Q2KHR2 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RFX7Q2KHR2 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
RFX7Q2KHR2 GXYLT1P3-201ENST00000453058 1193 ntBASIC24.01■■□□□ 1.43
RFX7Q2KHR2 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC24.01■■□□□ 1.43
RFX7Q2KHR2 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC24.01■■□□□ 1.43
RFX7Q2KHR2 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
RFX7Q2KHR2 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RFX7Q2KHR2 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC24■■□□□ 1.43
RFX7Q2KHR2 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC24■■□□□ 1.43
RFX7Q2KHR2 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC24■■□□□ 1.43
RFX7Q2KHR2 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC24■■□□□ 1.43
RFX7Q2KHR2 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC24■■□□□ 1.43
RFX7Q2KHR2 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
RFX7Q2KHR2 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC24■■□□□ 1.43
RFX7Q2KHR2 AC116351.2-201ENST00000606540 1585 ntBASIC24■■□□□ 1.43
RFX7Q2KHR2 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RFX7Q2KHR2 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RFX7Q2KHR2 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC24■■□□□ 1.43
RFX7Q2KHR2 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RFX7Q2KHR2 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC24■■□□□ 1.43
RFX7Q2KHR2 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC24■■□□□ 1.43
RFX7Q2KHR2 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RFX7Q2KHR2 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC24■■□□□ 1.43
RFX7Q2KHR2 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
RFX7Q2KHR2 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RFX7Q2KHR2 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RFX7Q2KHR2 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
RFX7Q2KHR2 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RFX7Q2KHR2 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC23.99■■□□□ 1.43
RFX7Q2KHR2 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
RFX7Q2KHR2 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RFX7Q2KHR2 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RFX7Q2KHR2 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
RFX7Q2KHR2 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
RFX7Q2KHR2 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC23.99■■□□□ 1.43
RFX7Q2KHR2 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC23.99■■□□□ 1.43
RFX7Q2KHR2 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC23.99■■□□□ 1.43
RFX7Q2KHR2 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
RFX7Q2KHR2 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC23.99■■□□□ 1.43
RFX7Q2KHR2 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
RFX7Q2KHR2 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
RFX7Q2KHR2 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
RFX7Q2KHR2 AL135905.2-201ENST00000584934 1404 ntBASIC23.99■■□□□ 1.43
RFX7Q2KHR2 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RFX7Q2KHR2 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RFX7Q2KHR2 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RFX7Q2KHR2 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RFX7Q2KHR2 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC23.98■■□□□ 1.43
RFX7Q2KHR2 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC23.98■■□□□ 1.43
RFX7Q2KHR2 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
RFX7Q2KHR2 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC23.98■■□□□ 1.43
RFX7Q2KHR2 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RFX7Q2KHR2 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms