Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SEC61A1P61619 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SEC61A1P61619 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SEC61A1P61619 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SEC61A1P61619 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SEC61A1P61619 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SEC61A1P61619 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SEC61A1P61619 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SEC61A1P61619 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
SEC61A1P61619 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.27■□□□□ 0.36
SEC61A1P61619 OR10C1-204ENST00000622521 1039 ntBASIC17.27■□□□□ 0.36
SEC61A1P61619 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.27■□□□□ 0.36
SEC61A1P61619 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.27■□□□□ 0.36
SEC61A1P61619 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SEC61A1P61619 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SEC61A1P61619 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SEC61A1P61619 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SEC61A1P61619 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SEC61A1P61619 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
SEC61A1P61619 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
SEC61A1P61619 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
SEC61A1P61619 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SEC61A1P61619 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SEC61A1P61619 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SEC61A1P61619 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
SEC61A1P61619 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SEC61A1P61619 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SEC61A1P61619 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
SEC61A1P61619 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SEC61A1P61619 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SEC61A1P61619 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SEC61A1P61619 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SEC61A1P61619 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SEC61A1P61619 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SEC61A1P61619 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.26■□□□□ 0.35
SEC61A1P61619 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.26■□□□□ 0.35
SEC61A1P61619 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
SEC61A1P61619 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.26■□□□□ 0.35
SEC61A1P61619 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SEC61A1P61619 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.26■□□□□ 0.35
SEC61A1P61619 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SEC61A1P61619 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SEC61A1P61619 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SEC61A1P61619 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SEC61A1P61619 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SEC61A1P61619 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SEC61A1P61619 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SEC61A1P61619 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SEC61A1P61619 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.25■□□□□ 0.35
SEC61A1P61619 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SEC61A1P61619 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SEC61A1P61619 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SEC61A1P61619 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SEC61A1P61619 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SEC61A1P61619 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SEC61A1P61619 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SEC61A1P61619 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
SEC61A1P61619 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.25■□□□□ 0.35
SEC61A1P61619 RARRES2P4-201ENST00000514074 484 ntBASIC17.25■□□□□ 0.35
SEC61A1P61619 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.25■□□□□ 0.35
SEC61A1P61619 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
SEC61A1P61619 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SEC61A1P61619 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SEC61A1P61619 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SEC61A1P61619 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.25■□□□□ 0.35
SEC61A1P61619 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SEC61A1P61619 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SEC61A1P61619 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SEC61A1P61619 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
SEC61A1P61619 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SEC61A1P61619 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SEC61A1P61619 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SEC61A1P61619 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.24■□□□□ 0.35
SEC61A1P61619 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SEC61A1P61619 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SEC61A1P61619 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
SEC61A1P61619 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
SEC61A1P61619 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SEC61A1P61619 MIPEPP3-201ENST00000412105 444 ntBASIC17.24■□□□□ 0.35
SEC61A1P61619 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SEC61A1P61619 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.24■□□□□ 0.35
SEC61A1P61619 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.24■□□□□ 0.35
SEC61A1P61619 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.24■□□□□ 0.35
SEC61A1P61619 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
SEC61A1P61619 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.24■□□□□ 0.35
SEC61A1P61619 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.24■□□□□ 0.35
SEC61A1P61619 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SEC61A1P61619 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SEC61A1P61619 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SEC61A1P61619 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SEC61A1P61619 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SEC61A1P61619 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SEC61A1P61619 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.24■□□□□ 0.35
SEC61A1P61619 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.23■□□□□ 0.35
SEC61A1P61619 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SEC61A1P61619 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SEC61A1P61619 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.23■□□□□ 0.35
SEC61A1P61619 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SEC61A1P61619 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SEC61A1P61619 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms