Protein–RNA interactions for Protein: P60510

PPP4C, Serine/threonine-protein phosphatase 4 catalytic subunit, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4CP60510 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PPP4CP60510 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC23.54■■□□□ 1.36
PPP4CP60510 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC23.54■■□□□ 1.36
PPP4CP60510 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PPP4CP60510 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC23.54■■□□□ 1.36
PPP4CP60510 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PPP4CP60510 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC23.54■■□□□ 1.36
PPP4CP60510 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PPP4CP60510 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PPP4CP60510 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC23.53■■□□□ 1.36
PPP4CP60510 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PPP4CP60510 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PPP4CP60510 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PPP4CP60510 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC23.53■■□□□ 1.36
PPP4CP60510 PPP1R14BP5-201ENST00000440334 435 ntBASIC23.53■■□□□ 1.36
PPP4CP60510 RBM17P1-201ENST00000453646 1190 ntBASIC23.53■■□□□ 1.36
PPP4CP60510 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC23.53■■□□□ 1.36
PPP4CP60510 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC23.53■■□□□ 1.36
PPP4CP60510 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC23.53■■□□□ 1.36
PPP4CP60510 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC23.53■■□□□ 1.36
PPP4CP60510 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PPP4CP60510 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
PPP4CP60510 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
PPP4CP60510 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
PPP4CP60510 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PPP4CP60510 AL512408.1-201ENST00000569378 2000 ntBASIC23.52■■□□□ 1.36
PPP4CP60510 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PPP4CP60510 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PPP4CP60510 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
PPP4CP60510 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PPP4CP60510 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC23.52■■□□□ 1.36
PPP4CP60510 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC23.52■■□□□ 1.36
PPP4CP60510 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
PPP4CP60510 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PPP4CP60510 LINC01023-201ENST00000606054 436 ntBASIC23.52■■□□□ 1.36
PPP4CP60510 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC23.52■■□□□ 1.36
PPP4CP60510 AC097493.4-201ENST00000641197 219 ntBASIC23.52■■□□□ 1.36
PPP4CP60510 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PPP4CP60510 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC23.52■■□□□ 1.36
PPP4CP60510 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
PPP4CP60510 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PPP4CP60510 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC23.52■■□□□ 1.36
PPP4CP60510 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC23.51■■□□□ 1.35
PPP4CP60510 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
PPP4CP60510 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC23.51■■□□□ 1.35
PPP4CP60510 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PPP4CP60510 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PPP4CP60510 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC23.51■■□□□ 1.35
PPP4CP60510 FEM1AP1-201ENST00000431297 1995 ntBASIC23.51■■□□□ 1.35
PPP4CP60510 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PPP4CP60510 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC23.51■■□□□ 1.35
PPP4CP60510 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC23.51■■□□□ 1.35
PPP4CP60510 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PPP4CP60510 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC23.51■■□□□ 1.35
PPP4CP60510 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC23.51■■□□□ 1.35
PPP4CP60510 DECR2-212ENST00000627716 352 ntTSL 2 BASIC23.51■■□□□ 1.35
PPP4CP60510 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
PPP4CP60510 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PPP4CP60510 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC23.51■■□□□ 1.35
PPP4CP60510 TMEM179-206ENST00000616017 1645 ntBASIC23.51■■□□□ 1.35
PPP4CP60510 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PPP4CP60510 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC23.51■■□□□ 1.35
PPP4CP60510 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PPP4CP60510 AC079598.2-202ENST00000546624 1451 ntBASIC23.5■■□□□ 1.35
PPP4CP60510 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC23.5■■□□□ 1.35
PPP4CP60510 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PPP4CP60510 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PPP4CP60510 GABARAPL3-202ENST00000624044 1851 ntBASIC23.5■■□□□ 1.35
PPP4CP60510 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC23.5■■□□□ 1.35
PPP4CP60510 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PPP4CP60510 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PPP4CP60510 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC23.5■■□□□ 1.35
PPP4CP60510 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC23.5■■□□□ 1.35
PPP4CP60510 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC23.5■■□□□ 1.35
PPP4CP60510 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PPP4CP60510 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC23.5■■□□□ 1.35
PPP4CP60510 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PPP4CP60510 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PPP4CP60510 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PPP4CP60510 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
PPP4CP60510 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PPP4CP60510 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PPP4CP60510 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC23.49■■□□□ 1.35
PPP4CP60510 MOK-225ENST00000522867 1883 ntTSL 5 BASIC23.49■■□□□ 1.35
PPP4CP60510 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PPP4CP60510 AP001271.2-201ENST00000624018 1556 ntBASIC23.49■■□□□ 1.35
PPP4CP60510 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PPP4CP60510 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PPP4CP60510 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PPP4CP60510 MMP23A-201ENST00000234610 1017 ntBASIC23.49■■□□□ 1.35
PPP4CP60510 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC23.49■■□□□ 1.35
PPP4CP60510 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PPP4CP60510 ABBA01031674.1-201ENST00000635145 728 ntBASIC23.49■■□□□ 1.35
PPP4CP60510 AL031985.4-201ENST00000642138 673 ntBASIC23.49■■□□□ 1.35
PPP4CP60510 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PPP4CP60510 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
PPP4CP60510 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PPP4CP60510 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC23.49■■□□□ 1.35
PPP4CP60510 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PPP4CP60510 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC23.48■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms