Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC14.76□□□□□ -0.05
CMC4P56277 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CMC4P56277 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CMC4P56277 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC14.76□□□□□ -0.05
CMC4P56277 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CMC4P56277 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CMC4P56277 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC14.75□□□□□ -0.05
CMC4P56277 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CMC4P56277 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CMC4P56277 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CMC4P56277 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC14.75□□□□□ -0.05
CMC4P56277 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CMC4P56277 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CMC4P56277 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CMC4P56277 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CMC4P56277 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CMC4P56277 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC14.75□□□□□ -0.05
CMC4P56277 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CMC4P56277 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CMC4P56277 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC14.75□□□□□ -0.05
CMC4P56277 TMEM191A-211ENST00000637163 1067 ntBASIC14.75□□□□□ -0.05
CMC4P56277 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC14.75□□□□□ -0.05
CMC4P56277 AC116351.2-201ENST00000606540 1585 ntBASIC14.75□□□□□ -0.05
CMC4P56277 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CMC4P56277 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CMC4P56277 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC14.75□□□□□ -0.05
CMC4P56277 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CMC4P56277 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CMC4P56277 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CMC4P56277 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC14.74□□□□□ -0.05
CMC4P56277 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
CMC4P56277 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CMC4P56277 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CMC4P56277 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC14.74□□□□□ -0.05
CMC4P56277 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CMC4P56277 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CMC4P56277 EFS-203ENST00000429593 2610 ntTSL 2 BASIC14.74□□□□□ -0.05
CMC4P56277 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CMC4P56277 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CMC4P56277 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC14.74□□□□□ -0.05
CMC4P56277 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CMC4P56277 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CMC4P56277 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC14.74□□□□□ -0.05
CMC4P56277 TSPY20P-201ENST00000450910 630 ntBASIC14.74□□□□□ -0.05
CMC4P56277 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC14.74□□□□□ -0.05
CMC4P56277 AC128676.1-201ENST00000454392 318 ntBASIC14.74□□□□□ -0.05
CMC4P56277 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC14.74□□□□□ -0.05
CMC4P56277 THEM4-205ENST00000489410 643 ntTSL 2 BASIC14.74□□□□□ -0.05
CMC4P56277 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC14.74□□□□□ -0.05
CMC4P56277 PNN-205ENST00000556530 601 ntTSL 2 BASIC14.74□□□□□ -0.05
CMC4P56277 RN7SL471P-201ENST00000580476 299 ntBASIC14.74□□□□□ -0.05
CMC4P56277 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC14.74□□□□□ -0.05
CMC4P56277 AC069544.1-201ENST00000609399 999 ntBASIC14.74□□□□□ -0.05
CMC4P56277 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CMC4P56277 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC14.74□□□□□ -0.05
CMC4P56277 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CMC4P56277 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CMC4P56277 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC14.74□□□□□ -0.05
CMC4P56277 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CMC4P56277 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CMC4P56277 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC14.74□□□□□ -0.05
CMC4P56277 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CMC4P56277 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
CMC4P56277 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CMC4P56277 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CMC4P56277 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CMC4P56277 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC14.73□□□□□ -0.05
CMC4P56277 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CMC4P56277 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC14.73□□□□□ -0.05
CMC4P56277 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CMC4P56277 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC14.73□□□□□ -0.05
CMC4P56277 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CMC4P56277 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CMC4P56277 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CMC4P56277 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CMC4P56277 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
CMC4P56277 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CMC4P56277 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC14.73□□□□□ -0.05
CMC4P56277 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC14.73□□□□□ -0.05
CMC4P56277 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CMC4P56277 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC14.73□□□□□ -0.05
CMC4P56277 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC14.73□□□□□ -0.05
CMC4P56277 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC14.73□□□□□ -0.05
CMC4P56277 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC14.73□□□□□ -0.05
CMC4P56277 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CMC4P56277 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CMC4P56277 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CMC4P56277 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CMC4P56277 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CMC4P56277 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC14.73□□□□□ -0.05
CMC4P56277 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CMC4P56277 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CMC4P56277 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC14.73□□□□□ -0.05
CMC4P56277 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CMC4P56277 AP006587.1-201ENST00000534129 1502 ntBASIC14.72□□□□□ -0.05
CMC4P56277 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC14.72□□□□□ -0.05
CMC4P56277 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
CMC4P56277 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CMC4P56277 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC14.72□□□□□ -0.05
CMC4P56277 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms