Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.79■■□□□ 1.08
PMS1P54277 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.79■■□□□ 1.08
PMS1P54277 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PMS1P54277 AL121832.2-201ENST00000610979 668 ntBASIC21.79■■□□□ 1.08
PMS1P54277 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.79■■□□□ 1.08
PMS1P54277 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.79■■□□□ 1.08
PMS1P54277 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.79■■□□□ 1.08
PMS1P54277 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PMS1P54277 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
PMS1P54277 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
PMS1P54277 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
PMS1P54277 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
PMS1P54277 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
PMS1P54277 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
PMS1P54277 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.79■■□□□ 1.08
PMS1P54277 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.79■■□□□ 1.08
PMS1P54277 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
PMS1P54277 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
PMS1P54277 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
PMS1P54277 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PMS1P54277 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PMS1P54277 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PMS1P54277 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
PMS1P54277 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PMS1P54277 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PMS1P54277 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.78■■□□□ 1.08
PMS1P54277 AC006970.2-201ENST00000450065 779 ntBASIC21.78■■□□□ 1.08
PMS1P54277 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.78■■□□□ 1.08
PMS1P54277 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.78■■□□□ 1.08
PMS1P54277 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.78■■□□□ 1.08
PMS1P54277 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
PMS1P54277 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PMS1P54277 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PMS1P54277 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PMS1P54277 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC21.78■■□□□ 1.08
PMS1P54277 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
PMS1P54277 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
PMS1P54277 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
PMS1P54277 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
PMS1P54277 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
PMS1P54277 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.77■■□□□ 1.08
PMS1P54277 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.77■■□□□ 1.08
PMS1P54277 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.08
PMS1P54277 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PMS1P54277 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PMS1P54277 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PMS1P54277 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PMS1P54277 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PMS1P54277 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.77■■□□□ 1.08
PMS1P54277 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PMS1P54277 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
PMS1P54277 DUSP5P2-201ENST00000426873 1033 ntBASIC21.77■■□□□ 1.08
PMS1P54277 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.77■■□□□ 1.08
PMS1P54277 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.77■■□□□ 1.08
PMS1P54277 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC21.77■■□□□ 1.08
PMS1P54277 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
PMS1P54277 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.76■■□□□ 1.07
PMS1P54277 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PMS1P54277 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
PMS1P54277 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
PMS1P54277 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.76■■□□□ 1.07
PMS1P54277 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
PMS1P54277 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PMS1P54277 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PMS1P54277 NCF1B-203ENST00000435988 1254 ntBASIC21.76■■□□□ 1.07
PMS1P54277 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.76■■□□□ 1.07
PMS1P54277 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PMS1P54277 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
PMS1P54277 Z82202.1-201ENST00000623446 1880 ntBASIC21.76■■□□□ 1.07
PMS1P54277 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
PMS1P54277 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PMS1P54277 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PMS1P54277 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PMS1P54277 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PMS1P54277 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.75■■□□□ 1.07
PMS1P54277 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PMS1P54277 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PMS1P54277 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PMS1P54277 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
PMS1P54277 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PMS1P54277 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.75■■□□□ 1.07
PMS1P54277 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PMS1P54277 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
PMS1P54277 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC21.75■■□□□ 1.07
PMS1P54277 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.75■■□□□ 1.07
PMS1P54277 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.75■■□□□ 1.07
PMS1P54277 TSPY6P-201ENST00000448518 926 ntBASIC21.75■■□□□ 1.07
PMS1P54277 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.75■■□□□ 1.07
PMS1P54277 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
PMS1P54277 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
PMS1P54277 AC098818.2-201ENST00000564925 2320 ntBASIC21.75■■□□□ 1.07
PMS1P54277 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.75■■□□□ 1.07
PMS1P54277 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC21.75■■□□□ 1.07
PMS1P54277 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PMS1P54277 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.75■■□□□ 1.07
PMS1P54277 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
PMS1P54277 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.75■■□□□ 1.07
PMS1P54277 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PMS1P54277 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.74■■□□□ 1.07
PMS1P54277 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms