Protein–RNA interactions for Protein: P53999

SUB1, Activated RNA polymerase II transcriptional coactivator p15, humanhuman

Known RBP eCLIP

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P53999 PRMT1-208ENST00000527412 463 ntTSL 36.72□□□□□ -1.333e-6■■■□□ 17.4
SUB1P53999 GAS5-227ENST00000456293 583 ntTSL 35.52□□□□□ -1.531e-15■■■□□ 17.4
SUB1P53999 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC12.34□□□□□ -0.432e-6■■■□□ 17.4
SUB1P53999 CAD-201ENST00000264705 7265 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.582e-6■■■□□ 17.4
SUB1P53999 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.562e-9■■■□□ 17.3
SUB1P53999 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC15.23■□□□□ 0.032e-9■■■□□ 17.3
SUB1P53999 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC14.89□□□□□ -0.032e-9■■■□□ 17.3
SUB1P53999 RFC2-203ENST00000463194 853 ntTSL 314.7□□□□□ -0.062e-9■■■□□ 17.3
SUB1P53999 RFC2-207ENST00000480432 871 ntTSL 314.7□□□□□ -0.062e-9■■■□□ 17.3
SUB1P53999 RFC2-210ENST00000493156 782 ntTSL 514.49□□□□□ -0.092e-9■■■□□ 17.3
SUB1P53999 RFC2-204ENST00000470266 881 ntTSL 57.8□□□□□ -1.162e-9■■■□□ 17.3
SUB1P53999 RFC2-211ENST00000494019 730 ntTSL 37.77□□□□□ -1.172e-9■■■□□ 17.3
SUB1P53999 RFC2-205ENST00000473493 304 ntTSL 37.26□□□□□ -1.252e-9■■■□□ 17.3
SUB1P53999 RFC2-206ENST00000479105 957 ntTSL 57.12□□□□□ -1.272e-9■■■□□ 17.3
SUB1P53999 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.369e-9■■■□□ 17.3
SUB1P53999 CD99-201ENST00000381177 756 ntTSL 27.76□□□□□ -1.179e-9■■■□□ 17.3
SUB1P53999 UBR4-206ENST00000419533 5583 ntTSL 57.66□□□□□ -1.189e-7■■■□□ 17.3
SUB1P53999 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.452e-7■■■□□ 17.3
SUB1P53999 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC16.19■□□□□ 0.183e-6■■■□□ 17.3
SUB1P53999 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.23e-6■■■□□ 17.3
SUB1P53999 HBS1L-204ENST00000367826 2703 ntTSL 2 BASIC8.18□□□□□ -1.12e-7■■■□□ 17.3
SUB1P53999 HBS1L-205ENST00000367837 7163 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.22e-7■■■□□ 17.3
SUB1P53999 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC5.42□□□□□ -1.542e-7■■■□□ 17.3
SUB1P53999 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC5.38□□□□□ -1.552e-7■■■□□ 17.3
SUB1P53999 HBS1L-210ENST00000527005 2224 ntTSL 1 (best)3.03□□□□□ -1.922e-7■■■□□ 17.3
SUB1P53999 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.245e-13■■■□□ 17.3
SUB1P53999 TWSG1-203ENST00000583147 2311 ntTSL 216.41■□□□□ 0.222e-9■■■□□ 17.3
SUB1P53999 DARS2-201ENST00000361951 3506 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.322e-9■■■□□ 17.3
SUB1P53999 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.22e-7■■■□□ 17.3
SUB1P53999 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.382e-7■■■□□ 17.3
SUB1P53999 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.42e-7■■■□□ 17.3
SUB1P53999 GLUL-204ENST00000417584 4065 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.722e-7■■■□□ 17.3
SUB1P53999 GLUL-212ENST00000491322 6132 ntTSL 1 (best)8.89□□□□□ -0.992e-7■■■□□ 17.3
SUB1P53999 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.376e-7■■■□□ 17.3
SUB1P53999 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.436e-7■■■□□ 17.3
SUB1P53999 RPL9-206ENST00000504470 689 ntTSL 29.1□□□□□ -0.952e-9■■■□□ 17.3
SUB1P53999 GAS5-226ENST00000455838 632 ntTSL 26.31□□□□□ -1.41e-15■■■□□ 17.2
SUB1P53999 GAS5-203ENST00000416952 799 ntTSL 25.56□□□□□ -1.521e-15■■■□□ 17.2
SUB1P53999 GAS5-215ENST00000442067 1114 ntTSL 24.04□□□□□ -1.769e-16■■■□□ 17.2
SUB1P53999 HK1-209ENST00000470050 314 ntTSL 512.4□□□□□ -0.427e-13■■■□□ 17.2
SUB1P53999 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.465e-9■■■□□ 17.2
SUB1P53999 MAP4-208ENST00000429422 3724 ntTSL 1 (best)9.2□□□□□ -0.945e-9■■■□□ 17.2
SUB1P53999 TMEM14C-202ENST00000466421 472 ntTSL 210.88□□□□□ -0.673e-8■■■□□ 17.2
SUB1P53999 EIF3B-210ENST00000468611 1868 ntTSL 211.91□□□□□ -0.57e-9■■■□□ 17.2
SUB1P53999 EIF3B-207ENST00000465670 2766 ntTSL 211.51□□□□□ -0.577e-9■■■□□ 17.2
SUB1P53999 EIF3B-211ENST00000475415 3745 ntTSL 28.39□□□□□ -1.077e-9■■■□□ 17.2
SUB1P53999 CALU-202ENST00000449187 2438 ntAPPRIS ALT1 TSL 1 (best) BASIC9.41□□□□□ -0.95e-8■■■□□ 17.2
SUB1P53999 OS9-205ENST00000413095 1660 ntTSL 2 BASIC13.79□□□□□ -0.22e-6■■■□□ 17.2
SUB1P53999 OS9-204ENST00000389146 2091 ntTSL 2 BASIC11.99□□□□□ -0.492e-6■■■□□ 17.2
SUB1P53999 OS9-207ENST00000439210 1946 ntTSL 2 BASIC11.82□□□□□ -0.522e-6■■■□□ 17.2
SUB1P53999 OS9-222ENST00000552787 962 ntTSL 211.42□□□□□ -0.582e-6■■■□□ 17.2
SUB1P53999 OS9-213ENST00000550372 503 ntTSL 411.27□□□□□ -0.612e-6■■■□□ 17.2
SUB1P53999 OS9-211ENST00000549897 700 ntTSL 211.27□□□□□ -0.612e-6■■■□□ 17.2
SUB1P53999 OS9-218ENST00000551035 2246 ntTSL 2 BASIC11.19□□□□□ -0.622e-6■■■□□ 17.2
SUB1P53999 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.642e-6■■■□□ 17.2
SUB1P53999 OS9-203ENST00000389142 2457 ntTSL 5 BASIC11.02□□□□□ -0.642e-6■■■□□ 17.2
SUB1P53999 OS9-206ENST00000435406 2346 ntTSL 2 BASIC10.93□□□□□ -0.662e-6■■■□□ 17.2
SUB1P53999 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.742e-6■■■□□ 17.2
SUB1P53999 OS9-219ENST00000551285 583 ntTSL 39.87□□□□□ -0.832e-6■■■□□ 17.2
SUB1P53999 OS9-223ENST00000553208 1022 ntTSL 39.87□□□□□ -0.832e-6■■■□□ 17.2
SUB1P53999 OS9-221ENST00000552423 609 ntTSL 39.87□□□□□ -0.832e-6■■■□□ 17.2
SUB1P53999 OS9-202ENST00000315970 2691 ntAPPRIS P4 TSL 1 (best) BASIC9.59□□□□□ -0.872e-6■■■□□ 17.2
SUB1P53999 OS9-216ENST00000550793 564 ntTSL 29.43□□□□□ -0.92e-6■■■□□ 17.2
SUB1P53999 OS9-217ENST00000550848 558 ntTSL 58.62□□□□□ -1.032e-6■■■□□ 17.2
SUB1P53999 OS9-209ENST00000547079 583 ntTSL 38.6□□□□□ -1.032e-6■■■□□ 17.2
SUB1P53999 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC15.39■□□□□ 0.054e-6■■■□□ 17.2
SUB1P53999 HIST1H2BN-201ENST00000396980 432 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.934e-6■■■□□ 17.2
SUB1P53999 KLHL7-206ENST00000459661 592 ntTSL 512.53□□□□□ -0.42e-6■■■□□ 17.2
SUB1P53999 KLHL7-210ENST00000479288 616 ntTSL 412.47□□□□□ -0.412e-6■■■□□ 17.2
SUB1P53999 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC12.32□□□□□ -0.442e-6■■■□□ 17.2
SUB1P53999 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.552e-6■■■□□ 17.2
SUB1P53999 PABPC4-219ENST00000525045 765 ntTSL 210.24□□□□□ -0.772e-6■■■□□ 17.2
SUB1P53999 PABPC4-208ENST00000461578 193 ntTSL 59.71□□□□□ -0.862e-6■■■□□ 17.2
SUB1P53999 PABPC4-212ENST00000477556 413 ntTSL 39.61□□□□□ -0.872e-6■■■□□ 17.2
SUB1P53999 KLHL7-213ENST00000521082 3165 ntTSL 1 (best)9.5□□□□□ -0.892e-6■■■□□ 17.2
SUB1P53999 PABPC4-215ENST00000484555 450 ntTSL 58.81□□□□□ -12e-6■■■□□ 17.2
SUB1P53999 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC8.74□□□□□ -1.012e-6■■■□□ 17.2
SUB1P53999 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC5.84□□□□□ -1.472e-6■■■□□ 17.2
SUB1P53999 PABPC4-222ENST00000527718 746 ntTSL 55.19□□□□□ -1.582e-6■■■□□ 17.2
SUB1P53999 KLHL7-211ENST00000479700 588 ntTSL 43.4□□□□□ -1.872e-6■■■□□ 17.2
SUB1P53999 KLHL7-209ENST00000477076 482 ntTSL 21.72□□□□□ -2.132e-6■■■□□ 17.2
SUB1P53999 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC4.74□□□□□ -1.651e-6■■■□□ 17.1
SUB1P53999 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC4.28□□□□□ -1.721e-6■■■□□ 17.1
SUB1P53999 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.081e-6■■■□□ 17.1
SUB1P53999 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.62■□□□□ 0.734e-6■■■□□ 17.1
SUB1P53999 FEZ2-210ENST00000451623 1869 ntTSL 1 (best)19.35■□□□□ 0.694e-6■■■□□ 17.1
SUB1P53999 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.584e-6■■■□□ 17.1
SUB1P53999 FEZ2-207ENST00000414288 556 ntTSL 45.67□□□□□ -1.54e-6■■■□□ 17.1
SUB1P53999 FEZ2-206ENST00000413938 1940 ntTSL 1 (best)4.29□□□□□ -1.724e-6■■■□□ 17.1
SUB1P53999 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.27□□□□□ -1.894e-6■■■□□ 17.1
SUB1P53999 FEZ2-209ENST00000441005 1455 ntTSL 32.8□□□□□ -1.964e-6■■■□□ 17.1
SUB1P53999 FEZ2-212ENST00000475815 4495 ntTSL 1 (best)2.37□□□□□ -2.034e-6■■■□□ 17.1
SUB1P53999 YWHAB-201ENST00000353703 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.754e-7■■■□□ 17.1
SUB1P53999 YWHAB-202ENST00000372839 3109 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.814e-7■■■□□ 17.1
SUB1P53999 CCAR1-218ENST00000630771 4540 ntTSL 5 BASIC6.6□□□□□ -1.359e-9■■■□□ 17.1
SUB1P53999 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.559e-9■■■□□ 17.1
SUB1P53999 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.129e-7■■■□□ 17.1
SUB1P53999 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.059e-7■■■□□ 17.1
SUB1P53999 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.299e-7■■■□□ 17.1
SUB1P53999 TMEM14B-203ENST00000460341 565 ntTSL 412.75□□□□□ -0.371e-15■■■□□ 17.1
Retrieved 100 of 11,644 protein–RNA pairs in 249.8 ms