Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SRP9P49458 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SRP9P49458 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.53■□□□□ 0.4
SRP9P49458 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.53■□□□□ 0.4
SRP9P49458 AC005181.1-201ENST00000604782 1256 ntBASIC17.53■□□□□ 0.4
SRP9P49458 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SRP9P49458 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SRP9P49458 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SRP9P49458 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SRP9P49458 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SRP9P49458 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
SRP9P49458 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SRP9P49458 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SRP9P49458 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SRP9P49458 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SRP9P49458 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SRP9P49458 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.52■□□□□ 0.4
SRP9P49458 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.52■□□□□ 0.4
SRP9P49458 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SRP9P49458 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.52■□□□□ 0.4
SRP9P49458 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.52■□□□□ 0.4
SRP9P49458 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SRP9P49458 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SRP9P49458 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SRP9P49458 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
SRP9P49458 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.52■□□□□ 0.4
SRP9P49458 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.52■□□□□ 0.4
SRP9P49458 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
SRP9P49458 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SRP9P49458 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
SRP9P49458 AC068338.2-201ENST00000563278 1430 ntBASIC17.52■□□□□ 0.4
SRP9P49458 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SRP9P49458 AC093503.3-201ENST00000624917 2352 ntBASIC17.52■□□□□ 0.39
SRP9P49458 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SRP9P49458 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
SRP9P49458 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SRP9P49458 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SRP9P49458 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
SRP9P49458 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
SRP9P49458 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.51■□□□□ 0.39
SRP9P49458 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SRP9P49458 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SRP9P49458 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SRP9P49458 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.51■□□□□ 0.39
SRP9P49458 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.51■□□□□ 0.39
SRP9P49458 AC006970.2-201ENST00000450065 779 ntBASIC17.51■□□□□ 0.39
SRP9P49458 FAM21FP-204ENST00000608637 956 ntBASIC17.51■□□□□ 0.39
SRP9P49458 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.51■□□□□ 0.39
SRP9P49458 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.51■□□□□ 0.39
SRP9P49458 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SRP9P49458 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SRP9P49458 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SRP9P49458 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SRP9P49458 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SRP9P49458 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SRP9P49458 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SRP9P49458 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SRP9P49458 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SRP9P49458 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SRP9P49458 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SRP9P49458 AC120498.9-201ENST00000339021 3867 ntBASIC17.5■□□□□ 0.39
SRP9P49458 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SRP9P49458 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SRP9P49458 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SRP9P49458 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SRP9P49458 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SRP9P49458 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SRP9P49458 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.5■□□□□ 0.39
SRP9P49458 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.5■□□□□ 0.39
SRP9P49458 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.5■□□□□ 0.39
SRP9P49458 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SRP9P49458 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.5■□□□□ 0.39
SRP9P49458 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
SRP9P49458 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
SRP9P49458 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.5■□□□□ 0.39
SRP9P49458 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SRP9P49458 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SRP9P49458 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SRP9P49458 AC011484.1-201ENST00000377652 1995 ntBASIC17.49■□□□□ 0.39
SRP9P49458 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
SRP9P49458 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SRP9P49458 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SRP9P49458 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
SRP9P49458 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SRP9P49458 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.49■□□□□ 0.39
SRP9P49458 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SRP9P49458 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SRP9P49458 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SRP9P49458 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.49■□□□□ 0.39
SRP9P49458 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SRP9P49458 MIR663A-201ENST00000385250 93 ntBASIC17.49■□□□□ 0.39
SRP9P49458 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
SRP9P49458 CYP2T1P-201ENST00000432607 1285 ntBASIC17.49■□□□□ 0.39
SRP9P49458 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SRP9P49458 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.49■□□□□ 0.39
SRP9P49458 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.49■□□□□ 0.39
SRP9P49458 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
SRP9P49458 RAP2CP1-201ENST00000605103 478 ntBASIC17.49■□□□□ 0.39
SRP9P49458 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SRP9P49458 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms