Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
SNCAP37840 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SNCAP37840 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC16.25■□□□□ 0.19
SNCAP37840 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
SNCAP37840 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SNCAP37840 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SNCAP37840 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
SNCAP37840 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.25■□□□□ 0.19
SNCAP37840 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
SNCAP37840 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SNCAP37840 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SNCAP37840 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SNCAP37840 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SNCAP37840 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SNCAP37840 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SNCAP37840 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SNCAP37840 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
SNCAP37840 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SNCAP37840 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SNCAP37840 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC16.25■□□□□ 0.19
SNCAP37840 DUX4L2-201ENST00000561772 1275 ntBASIC16.25■□□□□ 0.19
SNCAP37840 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC16.25■□□□□ 0.19
SNCAP37840 DUX4L6-201ENST00000626483 1275 ntBASIC16.25■□□□□ 0.19
SNCAP37840 DUX4L1-201ENST00000627662 1275 ntBASIC16.25■□□□□ 0.19
SNCAP37840 DUX4L8-201ENST00000629013 1275 ntBASIC16.25■□□□□ 0.19
SNCAP37840 DUX4L3-201ENST00000630187 1275 ntBASIC16.25■□□□□ 0.19
SNCAP37840 DUX4L7-201ENST00000630678 1275 ntBASIC16.25■□□□□ 0.19
SNCAP37840 DUX4L5-201ENST00000630834 1275 ntBASIC16.25■□□□□ 0.19
SNCAP37840 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SNCAP37840 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC16.25■□□□□ 0.19
SNCAP37840 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SNCAP37840 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SNCAP37840 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SNCAP37840 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.25■□□□□ 0.19
SNCAP37840 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
SNCAP37840 AL049812.1-201ENST00000432563 2267 ntBASIC16.25■□□□□ 0.19
SNCAP37840 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SNCAP37840 LINC02228-203ENST00000641970 1355 ntBASIC16.25■□□□□ 0.19
SNCAP37840 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SNCAP37840 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SNCAP37840 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SNCAP37840 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
SNCAP37840 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
SNCAP37840 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SNCAP37840 AC093484.2-201ENST00000580996 2166 ntBASIC16.24■□□□□ 0.19
SNCAP37840 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
SNCAP37840 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC16.24■□□□□ 0.19
SNCAP37840 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SNCAP37840 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SNCAP37840 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC16.24■□□□□ 0.19
SNCAP37840 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SNCAP37840 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
SNCAP37840 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SNCAP37840 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC16.24■□□□□ 0.19
SNCAP37840 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SNCAP37840 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SNCAP37840 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SNCAP37840 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SNCAP37840 AC010141.2-201ENST00000452426 721 ntBASIC16.24■□□□□ 0.19
SNCAP37840 STOX2-205ENST00000513034 807 ntTSL 3 BASIC16.24■□□□□ 0.19
SNCAP37840 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.24■□□□□ 0.19
SNCAP37840 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
SNCAP37840 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SNCAP37840 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SNCAP37840 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SNCAP37840 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SNCAP37840 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC16.23■□□□□ 0.19
SNCAP37840 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
SNCAP37840 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SNCAP37840 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC16.23■□□□□ 0.19
SNCAP37840 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.23■□□□□ 0.19
SNCAP37840 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
SNCAP37840 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SNCAP37840 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC16.23■□□□□ 0.19
SNCAP37840 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SNCAP37840 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SNCAP37840 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC16.23■□□□□ 0.19
SNCAP37840 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SNCAP37840 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC16.23■□□□□ 0.19
SNCAP37840 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SNCAP37840 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SNCAP37840 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.23■□□□□ 0.19
SNCAP37840 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SNCAP37840 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC16.23■□□□□ 0.19
SNCAP37840 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
SNCAP37840 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.23■□□□□ 0.19
SNCAP37840 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SNCAP37840 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SNCAP37840 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SNCAP37840 LTB4R2-202ENST00000528054 3092 ntBASIC16.22■□□□□ 0.19
SNCAP37840 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SNCAP37840 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SNCAP37840 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SNCAP37840 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SNCAP37840 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.22■□□□□ 0.19
SNCAP37840 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.22■□□□□ 0.19
SNCAP37840 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SNCAP37840 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC16.22■□□□□ 0.19
SNCAP37840 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SNCAP37840 NAA20-201ENST00000310450 920 ntTSL 2 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms