Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
PDE6BP35913 GOLGA6L3-201ENST00000507199 1679 ntBASIC24.51■■□□□ 1.51
PDE6BP35913 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PDE6BP35913 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PDE6BP35913 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PDE6BP35913 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PDE6BP35913 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
PDE6BP35913 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
PDE6BP35913 AC004951.3-201ENST00000418645 1148 ntBASIC24.51■■□□□ 1.51
PDE6BP35913 MFAP1P1-201ENST00000442257 1255 ntBASIC24.51■■□□□ 1.51
PDE6BP35913 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
PDE6BP35913 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC24.51■■□□□ 1.51
PDE6BP35913 KRT18P56-201ENST00000507275 550 ntBASIC24.51■■□□□ 1.51
PDE6BP35913 TOLLIP-AS1-201ENST00000530897 939 ntBASIC24.51■■□□□ 1.51
PDE6BP35913 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PDE6BP35913 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC24.51■■□□□ 1.51
PDE6BP35913 AC010653.2-201ENST00000623505 997 ntBASIC24.51■■□□□ 1.51
PDE6BP35913 AP000550.4-202ENST00000639755 178 ntBASIC24.51■■□□□ 1.51
PDE6BP35913 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC24.51■■□□□ 1.51
PDE6BP35913 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PDE6BP35913 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
PDE6BP35913 AC096733.2-201ENST00000609937 1394 ntBASIC24.51■■□□□ 1.51
PDE6BP35913 KRT16P6-202ENST00000425692 1426 ntBASIC24.51■■□□□ 1.51
PDE6BP35913 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
PDE6BP35913 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PDE6BP35913 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PDE6BP35913 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
PDE6BP35913 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
PDE6BP35913 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC24.5■■□□□ 1.51
PDE6BP35913 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PDE6BP35913 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
PDE6BP35913 AC092647.4-201ENST00000457211 535 ntBASIC24.5■■□□□ 1.51
PDE6BP35913 AC008040.2-201ENST00000461049 708 ntBASIC24.5■■□□□ 1.51
PDE6BP35913 COX11P1-201ENST00000489116 835 ntBASIC24.5■■□□□ 1.51
PDE6BP35913 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
PDE6BP35913 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
PDE6BP35913 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PDE6BP35913 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
PDE6BP35913 AC009947.2-201ENST00000444014 672 ntBASIC24.49■■□□□ 1.51
PDE6BP35913 KRT126P-201ENST00000549467 1181 ntBASIC24.49■■□□□ 1.51
PDE6BP35913 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC24.49■■□□□ 1.51
PDE6BP35913 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
PDE6BP35913 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
PDE6BP35913 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
PDE6BP35913 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC24.49■■□□□ 1.51
PDE6BP35913 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
PDE6BP35913 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC24.49■■□□□ 1.51
PDE6BP35913 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC24.49■■□□□ 1.51
PDE6BP35913 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PDE6BP35913 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
PDE6BP35913 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
PDE6BP35913 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PDE6BP35913 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PDE6BP35913 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
PDE6BP35913 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
PDE6BP35913 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
PDE6BP35913 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PDE6BP35913 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
PDE6BP35913 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC24.48■■□□□ 1.51
PDE6BP35913 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
PDE6BP35913 PTPA-216ENST00000432651 857 ntTSL 2 BASIC24.48■■□□□ 1.51
PDE6BP35913 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
PDE6BP35913 FAM207BP-201ENST00000447172 505 ntBASIC24.48■■□□□ 1.51
PDE6BP35913 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
PDE6BP35913 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC24.48■■□□□ 1.51
PDE6BP35913 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC24.48■■□□□ 1.51
PDE6BP35913 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
PDE6BP35913 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC24.48■■□□□ 1.51
PDE6BP35913 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC24.48■■□□□ 1.51
PDE6BP35913 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC24.48■■□□□ 1.51
PDE6BP35913 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
PDE6BP35913 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC24.48■■□□□ 1.51
PDE6BP35913 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PDE6BP35913 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC24.48■■□□□ 1.51
PDE6BP35913 AC005229.4-201ENST00000610085 2198 ntBASIC24.47■■□□□ 1.51
PDE6BP35913 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PDE6BP35913 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC24.47■■□□□ 1.51
PDE6BP35913 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PDE6BP35913 AC007663.1-201ENST00000438948 1240 ntBASIC24.47■■□□□ 1.51
PDE6BP35913 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC24.47■■□□□ 1.51
PDE6BP35913 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
PDE6BP35913 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
PDE6BP35913 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC24.47■■□□□ 1.51
PDE6BP35913 HLA-A-209ENST00000638375 975 ntBASIC24.47■■□□□ 1.51
PDE6BP35913 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
PDE6BP35913 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PDE6BP35913 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
PDE6BP35913 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
PDE6BP35913 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
PDE6BP35913 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC24.46■■□□□ 1.51
PDE6BP35913 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC24.46■■□□□ 1.51
PDE6BP35913 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC24.46■■□□□ 1.51
PDE6BP35913 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC24.46■■□□□ 1.51
PDE6BP35913 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
PDE6BP35913 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PDE6BP35913 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC24.46■■□□□ 1.51
PDE6BP35913 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PDE6BP35913 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC24.46■■□□□ 1.51
PDE6BP35913 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC24.46■■□□□ 1.51
PDE6BP35913 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC24.46■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms