Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
CLCN1P35523 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC22.45■■□□□ 1.18
CLCN1P35523 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CLCN1P35523 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CLCN1P35523 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
CLCN1P35523 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC22.45■■□□□ 1.18
CLCN1P35523 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC22.45■■□□□ 1.18
CLCN1P35523 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC22.45■■□□□ 1.18
CLCN1P35523 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC22.45■■□□□ 1.18
CLCN1P35523 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC22.45■■□□□ 1.18
CLCN1P35523 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CLCN1P35523 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CLCN1P35523 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC22.45■■□□□ 1.18
CLCN1P35523 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CLCN1P35523 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
CLCN1P35523 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CLCN1P35523 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC22.45■■□□□ 1.18
CLCN1P35523 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CLCN1P35523 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC22.45■■□□□ 1.18
CLCN1P35523 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
CLCN1P35523 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
CLCN1P35523 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CLCN1P35523 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC22.44■■□□□ 1.18
CLCN1P35523 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CLCN1P35523 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC22.44■■□□□ 1.18
CLCN1P35523 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CLCN1P35523 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CLCN1P35523 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CLCN1P35523 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC22.44■■□□□ 1.18
CLCN1P35523 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CLCN1P35523 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC22.44■■□□□ 1.18
CLCN1P35523 AC123595.1-201ENST00000440769 1046 ntBASIC22.44■■□□□ 1.18
CLCN1P35523 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC22.44■■□□□ 1.18
CLCN1P35523 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC22.44■■□□□ 1.18
CLCN1P35523 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
CLCN1P35523 AC079140.4-201ENST00000507448 529 ntBASIC22.44■■□□□ 1.18
CLCN1P35523 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CLCN1P35523 SP2-202ENST00000613139 908 ntTSL 5 BASIC22.44■■□□□ 1.18
CLCN1P35523 LINC02228-203ENST00000641970 1355 ntBASIC22.44■■□□□ 1.18
CLCN1P35523 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CLCN1P35523 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CLCN1P35523 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CLCN1P35523 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CLCN1P35523 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CLCN1P35523 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
CLCN1P35523 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC22.43■■□□□ 1.18
CLCN1P35523 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CLCN1P35523 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CLCN1P35523 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
CLCN1P35523 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CLCN1P35523 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CLCN1P35523 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
CLCN1P35523 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC22.42■■□□□ 1.18
CLCN1P35523 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC22.42■■□□□ 1.18
CLCN1P35523 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
CLCN1P35523 PRORSD1P-202ENST00000563365 2154 ntBASIC22.42■■□□□ 1.18
CLCN1P35523 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
CLCN1P35523 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
CLCN1P35523 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
CLCN1P35523 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
CLCN1P35523 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CLCN1P35523 STK25-205ENST00000405883 1904 ntTSL 2 BASIC22.42■■□□□ 1.18
CLCN1P35523 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
CLCN1P35523 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC22.42■■□□□ 1.18
CLCN1P35523 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CLCN1P35523 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CLCN1P35523 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CLCN1P35523 TERF1P2-201ENST00000583350 1212 ntBASIC22.42■■□□□ 1.18
CLCN1P35523 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CLCN1P35523 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CLCN1P35523 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CLCN1P35523 H19-201ENST00000411754 1788 ntTSL 5 BASIC22.42■■□□□ 1.18
CLCN1P35523 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC22.42■■□□□ 1.18
CLCN1P35523 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
CLCN1P35523 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CLCN1P35523 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC22.42■■□□□ 1.18
CLCN1P35523 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
CLCN1P35523 TMEM179-206ENST00000616017 1645 ntBASIC22.42■■□□□ 1.18
CLCN1P35523 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
CLCN1P35523 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CLCN1P35523 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
CLCN1P35523 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC22.41■■□□□ 1.18
CLCN1P35523 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CLCN1P35523 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CLCN1P35523 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
CLCN1P35523 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
CLCN1P35523 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CLCN1P35523 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CLCN1P35523 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
CLCN1P35523 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC22.41■■□□□ 1.18
CLCN1P35523 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
CLCN1P35523 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
CLCN1P35523 YBX1P1-201ENST00000445822 960 ntBASIC22.41■■□□□ 1.18
CLCN1P35523 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC22.41■■□□□ 1.18
CLCN1P35523 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC22.41■■□□□ 1.18
CLCN1P35523 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC22.41■■□□□ 1.18
CLCN1P35523 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
CLCN1P35523 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
CLCN1P35523 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
CLCN1P35523 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms