Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HOXD11P31277 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HOXD11P31277 LINC01529-204ENST00000636474 1715 ntBASIC20.84■□□□□ 0.93
HOXD11P31277 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HOXD11P31277 NIPA2P4-201ENST00000523928 1341 ntBASIC20.84■□□□□ 0.93
HOXD11P31277 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HOXD11P31277 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.84■□□□□ 0.93
HOXD11P31277 AC239809.2-201ENST00000415381 517 ntBASIC20.84■□□□□ 0.93
HOXD11P31277 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HOXD11P31277 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.84■□□□□ 0.93
HOXD11P31277 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HOXD11P31277 SLC25A3P1-201ENST00000443844 931 ntBASIC20.84■□□□□ 0.93
HOXD11P31277 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.84■□□□□ 0.93
HOXD11P31277 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC20.84■□□□□ 0.93
HOXD11P31277 TPT1P6-201ENST00000458298 514 ntBASIC20.84■□□□□ 0.93
HOXD11P31277 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.84■□□□□ 0.93
HOXD11P31277 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HOXD11P31277 SATB1-AS1-242ENST00000627496 807 ntTSL 5 BASIC20.84■□□□□ 0.93
HOXD11P31277 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HOXD11P31277 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
HOXD11P31277 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HOXD11P31277 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HOXD11P31277 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC20.84■□□□□ 0.93
HOXD11P31277 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.84■□□□□ 0.93
HOXD11P31277 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HOXD11P31277 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.83■□□□□ 0.93
HOXD11P31277 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HOXD11P31277 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
HOXD11P31277 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
HOXD11P31277 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HOXD11P31277 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HOXD11P31277 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HOXD11P31277 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HOXD11P31277 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.83■□□□□ 0.93
HOXD11P31277 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.83■□□□□ 0.93
HOXD11P31277 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
HOXD11P31277 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.83■□□□□ 0.93
HOXD11P31277 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC20.83■□□□□ 0.93
HOXD11P31277 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.83■□□□□ 0.93
HOXD11P31277 AC246785.2-201ENST00000432512 513 ntBASIC20.83■□□□□ 0.93
HOXD11P31277 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC20.83■□□□□ 0.93
HOXD11P31277 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HOXD11P31277 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.83■□□□□ 0.93
HOXD11P31277 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.83■□□□□ 0.93
HOXD11P31277 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC20.83■□□□□ 0.93
HOXD11P31277 AL034346.1-201ENST00000568244 1277 ntBASIC20.83■□□□□ 0.93
HOXD11P31277 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.83■□□□□ 0.93
HOXD11P31277 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.83■□□□□ 0.93
HOXD11P31277 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
HOXD11P31277 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.83■□□□□ 0.93
HOXD11P31277 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC20.83■□□□□ 0.93
HOXD11P31277 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.83■□□□□ 0.93
HOXD11P31277 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HOXD11P31277 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HOXD11P31277 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.83■□□□□ 0.92
HOXD11P31277 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HOXD11P31277 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
HOXD11P31277 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
HOXD11P31277 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.82■□□□□ 0.92
HOXD11P31277 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HOXD11P31277 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HOXD11P31277 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.82■□□□□ 0.92
HOXD11P31277 LINC01377-201ENST00000505396 649 ntTSL 2 BASIC20.82■□□□□ 0.92
HOXD11P31277 AC010486.3-201ENST00000511602 785 ntBASIC20.82■□□□□ 0.92
HOXD11P31277 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HOXD11P31277 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HOXD11P31277 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.82■□□□□ 0.92
HOXD11P31277 AC013452.2-201ENST00000557910 743 ntTSL 5 BASIC20.82■□□□□ 0.92
HOXD11P31277 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC20.82■□□□□ 0.92
HOXD11P31277 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.82■□□□□ 0.92
HOXD11P31277 LINC00564-201ENST00000567258 1119 ntBASIC20.82■□□□□ 0.92
HOXD11P31277 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HOXD11P31277 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.82■□□□□ 0.92
HOXD11P31277 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC20.82■□□□□ 0.92
HOXD11P31277 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.82■□□□□ 0.92
HOXD11P31277 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.82■□□□□ 0.92
HOXD11P31277 APOBEC3A-205ENST00000618553 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HOXD11P31277 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC20.82■□□□□ 0.92
HOXD11P31277 PRIM1-201ENST00000338193 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HOXD11P31277 AC100803.1-201ENST00000501440 1380 ntTSL 2 BASIC20.82■□□□□ 0.92
HOXD11P31277 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HOXD11P31277 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
HOXD11P31277 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HOXD11P31277 AL121603.2-201ENST00000557373 2117 ntBASIC20.81■□□□□ 0.92
HOXD11P31277 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.81■□□□□ 0.92
HOXD11P31277 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
HOXD11P31277 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
HOXD11P31277 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HOXD11P31277 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HOXD11P31277 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.81■□□□□ 0.92
HOXD11P31277 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HOXD11P31277 LGALS14-201ENST00000360675 773 ntAPPRIS P3 TSL 3 BASIC20.81■□□□□ 0.92
HOXD11P31277 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
HOXD11P31277 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.81■□□□□ 0.92
HOXD11P31277 CETN4P-201ENST00000432407 469 ntBASIC20.81■□□□□ 0.92
HOXD11P31277 BX664615.1-201ENST00000443558 458 ntBASIC20.81■□□□□ 0.92
HOXD11P31277 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC20.81■□□□□ 0.92
HOXD11P31277 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.81■□□□□ 0.92
HOXD11P31277 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.81■□□□□ 0.92
HOXD11P31277 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms