Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.78■□□□□ 0.6
PTPN6P29350 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PTPN6P29350 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.77■□□□□ 0.6
PTPN6P29350 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN6P29350 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN6P29350 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN6P29350 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
PTPN6P29350 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN6P29350 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN6P29350 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN6P29350 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN6P29350 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN6P29350 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN6P29350 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN6P29350 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN6P29350 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN6P29350 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
PTPN6P29350 AL138781.1-201ENST00000566567 1274 ntBASIC18.77■□□□□ 0.6
PTPN6P29350 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.77■□□□□ 0.6
PTPN6P29350 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.77■□□□□ 0.6
PTPN6P29350 AL031963.3-201ENST00000606441 850 ntBASIC18.77■□□□□ 0.6
PTPN6P29350 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN6P29350 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
PTPN6P29350 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN6P29350 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN6P29350 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.77■□□□□ 0.6
PTPN6P29350 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.77■□□□□ 0.6
PTPN6P29350 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.77■□□□□ 0.59
PTPN6P29350 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.59
PTPN6P29350 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.77■□□□□ 0.59
PTPN6P29350 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
PTPN6P29350 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.77■□□□□ 0.59
PTPN6P29350 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.76■□□□□ 0.59
PTPN6P29350 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.76■□□□□ 0.59
PTPN6P29350 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.76■□□□□ 0.59
PTPN6P29350 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.76■□□□□ 0.59
PTPN6P29350 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PTPN6P29350 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN6P29350 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN6P29350 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN6P29350 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN6P29350 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PTPN6P29350 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.76■□□□□ 0.59
PTPN6P29350 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.76■□□□□ 0.59
PTPN6P29350 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN6P29350 AC105020.6-201ENST00000621523 1217 ntBASIC18.76■□□□□ 0.59
PTPN6P29350 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.76■□□□□ 0.59
PTPN6P29350 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.76■□□□□ 0.59
PTPN6P29350 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.76■□□□□ 0.59
PTPN6P29350 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.76■□□□□ 0.59
PTPN6P29350 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN6P29350 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.76■□□□□ 0.59
PTPN6P29350 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
PTPN6P29350 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN6P29350 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN6P29350 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PTPN6P29350 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.76■□□□□ 0.59
PTPN6P29350 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN6P29350 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN6P29350 Z82202.1-201ENST00000623446 1880 ntBASIC18.75■□□□□ 0.59
PTPN6P29350 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN6P29350 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.75■□□□□ 0.59
PTPN6P29350 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN6P29350 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN6P29350 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN6P29350 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
PTPN6P29350 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
PTPN6P29350 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.75■□□□□ 0.59
PTPN6P29350 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.75■□□□□ 0.59
PTPN6P29350 MIPEPP3-201ENST00000412105 444 ntBASIC18.75■□□□□ 0.59
PTPN6P29350 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.75■□□□□ 0.59
PTPN6P29350 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.75■□□□□ 0.59
PTPN6P29350 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN6P29350 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN6P29350 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN6P29350 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN6P29350 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN6P29350 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN6P29350 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PTPN6P29350 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN6P29350 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.74■□□□□ 0.59
PTPN6P29350 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN6P29350 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN6P29350 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.74■□□□□ 0.59
PTPN6P29350 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.74■□□□□ 0.59
PTPN6P29350 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.74■□□□□ 0.59
PTPN6P29350 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN6P29350 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.74■□□□□ 0.59
PTPN6P29350 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
PTPN6P29350 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN6P29350 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN6P29350 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN6P29350 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN6P29350 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.74■□□□□ 0.59
PTPN6P29350 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.74■□□□□ 0.59
PTPN6P29350 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.74■□□□□ 0.59
PTPN6P29350 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN6P29350 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.74■□□□□ 0.59
PTPN6P29350 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.74■□□□□ 0.59
PTPN6P29350 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms