Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
GDF1P27539 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
GDF1P27539 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
GDF1P27539 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
GDF1P27539 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.96■□□□□ 0.47
GDF1P27539 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.96■□□□□ 0.47
GDF1P27539 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
GDF1P27539 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GDF1P27539 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
GDF1P27539 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
GDF1P27539 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GDF1P27539 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.96■□□□□ 0.47
GDF1P27539 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
GDF1P27539 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
GDF1P27539 KRT16P5-201ENST00000455284 522 ntBASIC17.96■□□□□ 0.47
GDF1P27539 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.96■□□□□ 0.47
GDF1P27539 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GDF1P27539 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.96■□□□□ 0.47
GDF1P27539 PHGDH-210ENST00000641115 1638 ntBASIC17.96■□□□□ 0.47
GDF1P27539 AP005212.1-201ENST00000581547 1997 ntBASIC17.96■□□□□ 0.47
GDF1P27539 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
GDF1P27539 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GDF1P27539 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
GDF1P27539 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
GDF1P27539 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
GDF1P27539 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
GDF1P27539 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.96■□□□□ 0.47
GDF1P27539 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GDF1P27539 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
GDF1P27539 AC116351.2-201ENST00000606540 1585 ntBASIC17.96■□□□□ 0.46
GDF1P27539 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
GDF1P27539 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
GDF1P27539 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
GDF1P27539 FEM1AP1-201ENST00000431297 1995 ntBASIC17.95■□□□□ 0.46
GDF1P27539 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.95■□□□□ 0.46
GDF1P27539 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GDF1P27539 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
GDF1P27539 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
GDF1P27539 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GDF1P27539 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GDF1P27539 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.95■□□□□ 0.46
GDF1P27539 RPS2P55-201ENST00000397318 883 ntBASIC17.95■□□□□ 0.46
GDF1P27539 AL596275.1-201ENST00000423464 877 ntBASIC17.95■□□□□ 0.46
GDF1P27539 AC012618.2-201ENST00000428058 849 ntBASIC17.95■□□□□ 0.46
GDF1P27539 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
GDF1P27539 AC107956.1-201ENST00000494359 873 ntBASIC17.95■□□□□ 0.46
GDF1P27539 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.95■□□□□ 0.46
GDF1P27539 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
GDF1P27539 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
GDF1P27539 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GDF1P27539 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GDF1P27539 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.95■□□□□ 0.46
GDF1P27539 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
GDF1P27539 BX119927.1-201ENST00000636596 1552 ntBASIC17.95■□□□□ 0.46
GDF1P27539 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
GDF1P27539 AC018553.1-201ENST00000616682 1458 ntBASIC17.95■□□□□ 0.46
GDF1P27539 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
GDF1P27539 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GDF1P27539 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.94■□□□□ 0.46
GDF1P27539 AP006587.1-201ENST00000534129 1502 ntBASIC17.94■□□□□ 0.46
GDF1P27539 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
GDF1P27539 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.94■□□□□ 0.46
GDF1P27539 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.94■□□□□ 0.46
GDF1P27539 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
GDF1P27539 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.94■□□□□ 0.46
GDF1P27539 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
GDF1P27539 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
GDF1P27539 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GDF1P27539 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
GDF1P27539 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.94■□□□□ 0.46
GDF1P27539 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.94■□□□□ 0.46
GDF1P27539 RARRES2P10-201ENST00000564312 460 ntBASIC17.94■□□□□ 0.46
GDF1P27539 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.94■□□□□ 0.46
GDF1P27539 AP001412.1-201ENST00000608405 714 ntBASIC17.94■□□□□ 0.46
GDF1P27539 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GDF1P27539 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.94■□□□□ 0.46
GDF1P27539 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.94■□□□□ 0.46
GDF1P27539 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GDF1P27539 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.94■□□□□ 0.46
GDF1P27539 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GDF1P27539 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.94■□□□□ 0.46
GDF1P27539 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GDF1P27539 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
GDF1P27539 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
GDF1P27539 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GDF1P27539 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
GDF1P27539 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
GDF1P27539 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GDF1P27539 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
GDF1P27539 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GDF1P27539 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
GDF1P27539 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
GDF1P27539 SNORA78-201ENST00000459373 127 ntBASIC17.93■□□□□ 0.46
GDF1P27539 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GDF1P27539 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.93■□□□□ 0.46
GDF1P27539 AC233702.5-201ENST00000584107 538 ntBASIC17.93■□□□□ 0.46
GDF1P27539 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
GDF1P27539 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
GDF1P27539 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
GDF1P27539 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms