Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFX1P22670 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFX1P22670 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFX1P22670 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFX1P22670 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFX1P22670 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.55■■□□□ 1.04
RFX1P22670 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.55■■□□□ 1.04
RFX1P22670 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
RFX1P22670 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RFX1P22670 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.55■■□□□ 1.04
RFX1P22670 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.55■■□□□ 1.04
RFX1P22670 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.55■■□□□ 1.04
RFX1P22670 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.55■■□□□ 1.04
RFX1P22670 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.55■■□□□ 1.04
RFX1P22670 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
RFX1P22670 MIR4497-201ENST00000583208 89 ntBASIC21.55■■□□□ 1.04
RFX1P22670 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RFX1P22670 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
RFX1P22670 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.55■■□□□ 1.04
RFX1P22670 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFX1P22670 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFX1P22670 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
RFX1P22670 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFX1P22670 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFX1P22670 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RFX1P22670 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFX1P22670 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFX1P22670 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RFX1P22670 KRT16P6-202ENST00000425692 1426 ntBASIC21.55■■□□□ 1.04
RFX1P22670 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RFX1P22670 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
RFX1P22670 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RFX1P22670 PCDHAC2-203ENST00000615316 3011 ntBASIC21.54■■□□□ 1.04
RFX1P22670 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RFX1P22670 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
RFX1P22670 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RFX1P22670 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RFX1P22670 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RFX1P22670 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RFX1P22670 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.54■■□□□ 1.04
RFX1P22670 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.54■■□□□ 1.04
RFX1P22670 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
RFX1P22670 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.54■■□□□ 1.04
RFX1P22670 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RFX1P22670 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.54■■□□□ 1.04
RFX1P22670 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RFX1P22670 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RFX1P22670 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RFX1P22670 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RFX1P22670 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RFX1P22670 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.54■■□□□ 1.04
RFX1P22670 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RFX1P22670 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.53■■□□□ 1.04
RFX1P22670 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.53■■□□□ 1.04
RFX1P22670 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RFX1P22670 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RFX1P22670 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RFX1P22670 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RFX1P22670 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.53■■□□□ 1.04
RFX1P22670 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RFX1P22670 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RFX1P22670 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RFX1P22670 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RFX1P22670 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RFX1P22670 HLA-G-202ENST00000376815 851 ntBASIC21.53■■□□□ 1.04
RFX1P22670 HLA-G-203ENST00000376818 1127 ntBASIC21.53■■□□□ 1.04
RFX1P22670 KRT17P3-201ENST00000420566 1262 ntBASIC21.53■■□□□ 1.04
RFX1P22670 AL355472.2-201ENST00000422958 438 ntBASIC21.53■■□□□ 1.04
RFX1P22670 GXYLT1P3-201ENST00000453058 1193 ntBASIC21.53■■□□□ 1.04
RFX1P22670 AC023632.3-201ENST00000521633 145 ntBASIC21.53■■□□□ 1.04
RFX1P22670 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.53■■□□□ 1.04
RFX1P22670 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.53■■□□□ 1.04
RFX1P22670 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RFX1P22670 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RFX1P22670 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.53■■□□□ 1.04
RFX1P22670 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RFX1P22670 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RFX1P22670 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC21.53■■□□□ 1.04
RFX1P22670 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
RFX1P22670 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
RFX1P22670 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
RFX1P22670 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RFX1P22670 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RFX1P22670 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RFX1P22670 CBFB-203ENST00000561924 584 ntTSL 5 BASIC21.52■■□□□ 1.04
RFX1P22670 C2orf69P4-201ENST00000565394 541 ntBASIC21.52■■□□□ 1.04
RFX1P22670 AC060766.5-201ENST00000590539 871 ntBASIC21.52■■□□□ 1.04
RFX1P22670 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.52■■□□□ 1.04
RFX1P22670 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RFX1P22670 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.52■■□□□ 1.04
RFX1P22670 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RFX1P22670 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RFX1P22670 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RFX1P22670 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
RFX1P22670 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
RFX1P22670 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
RFX1P22670 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.03
RFX1P22670 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.52■■□□□ 1.03
RFX1P22670 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
RFX1P22670 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms