Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
CDH3P22223 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CDH3P22223 AC142381.4-202ENST00000563973 229 ntBASIC19.35■□□□□ 0.69
CDH3P22223 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH3P22223 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.35■□□□□ 0.69
CDH3P22223 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH3P22223 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH3P22223 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH3P22223 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CDH3P22223 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CDH3P22223 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH3P22223 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.34■□□□□ 0.69
CDH3P22223 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.34■□□□□ 0.69
CDH3P22223 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CDH3P22223 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDH3P22223 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH3P22223 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH3P22223 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH3P22223 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDH3P22223 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CDH3P22223 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH3P22223 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
CDH3P22223 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH3P22223 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.34■□□□□ 0.69
CDH3P22223 AC069544.1-201ENST00000609399 999 ntBASIC19.34■□□□□ 0.69
CDH3P22223 AC120498.8-201ENST00000614275 531 ntBASIC19.34■□□□□ 0.69
CDH3P22223 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.34■□□□□ 0.69
CDH3P22223 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CDH3P22223 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDH3P22223 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH3P22223 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH3P22223 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.34■□□□□ 0.69
CDH3P22223 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH3P22223 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDH3P22223 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH3P22223 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.34■□□□□ 0.69
CDH3P22223 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDH3P22223 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
CDH3P22223 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDH3P22223 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
CDH3P22223 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CDH3P22223 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CDH3P22223 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDH3P22223 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.33■□□□□ 0.69
CDH3P22223 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.33■□□□□ 0.68
CDH3P22223 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CDH3P22223 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.33■□□□□ 0.68
CDH3P22223 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.33■□□□□ 0.68
CDH3P22223 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.33■□□□□ 0.68
CDH3P22223 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.33■□□□□ 0.68
CDH3P22223 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.33■□□□□ 0.68
CDH3P22223 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
CDH3P22223 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDH3P22223 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CDH3P22223 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.33■□□□□ 0.68
CDH3P22223 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDH3P22223 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CDH3P22223 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.33■□□□□ 0.68
CDH3P22223 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.33■□□□□ 0.68
CDH3P22223 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CDH3P22223 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.32■□□□□ 0.68
CDH3P22223 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDH3P22223 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.32■□□□□ 0.68
CDH3P22223 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.32■□□□□ 0.68
CDH3P22223 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDH3P22223 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.32■□□□□ 0.68
CDH3P22223 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CDH3P22223 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDH3P22223 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.32■□□□□ 0.68
CDH3P22223 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDH3P22223 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDH3P22223 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
CDH3P22223 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.32■□□□□ 0.68
CDH3P22223 GCSHP5-201ENST00000443090 522 ntBASIC19.32■□□□□ 0.68
CDH3P22223 RPS2P52-201ENST00000469610 820 ntBASIC19.32■□□□□ 0.68
CDH3P22223 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CDH3P22223 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.32■□□□□ 0.68
CDH3P22223 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.32■□□□□ 0.68
CDH3P22223 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.32■□□□□ 0.68
CDH3P22223 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDH3P22223 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.32■□□□□ 0.68
CDH3P22223 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.32■□□□□ 0.68
CDH3P22223 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDH3P22223 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.32■□□□□ 0.68
CDH3P22223 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDH3P22223 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.32■□□□□ 0.68
CDH3P22223 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDH3P22223 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDH3P22223 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDH3P22223 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.32■□□□□ 0.68
CDH3P22223 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.32■□□□□ 0.68
CDH3P22223 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.32■□□□□ 0.68
CDH3P22223 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.31■□□□□ 0.68
CDH3P22223 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDH3P22223 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.31■□□□□ 0.68
CDH3P22223 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDH3P22223 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.31■□□□□ 0.68
CDH3P22223 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CDH3P22223 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.31■□□□□ 0.68
CDH3P22223 HLA-G-202ENST00000376815 851 ntBASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms