Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.99■□□□□ 0.79
HLA-DPA1P20036 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.99■□□□□ 0.79
HLA-DPA1P20036 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.99■□□□□ 0.79
HLA-DPA1P20036 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.99■□□□□ 0.79
HLA-DPA1P20036 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.99■□□□□ 0.79
HLA-DPA1P20036 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.99■□□□□ 0.79
HLA-DPA1P20036 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-DPA1P20036 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-DPA1P20036 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-DPA1P20036 SLC25A24-204ENST00000569674 2357 ntBASIC19.99■□□□□ 0.79
HLA-DPA1P20036 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-DPA1P20036 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.99■□□□□ 0.79
HLA-DPA1P20036 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-DPA1P20036 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-DPA1P20036 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HLA-DPA1P20036 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HLA-DPA1P20036 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.98■□□□□ 0.79
HLA-DPA1P20036 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
HLA-DPA1P20036 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HLA-DPA1P20036 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HLA-DPA1P20036 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.98■□□□□ 0.79
HLA-DPA1P20036 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.98■□□□□ 0.79
HLA-DPA1P20036 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.98■□□□□ 0.79
HLA-DPA1P20036 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.98■□□□□ 0.79
HLA-DPA1P20036 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.98■□□□□ 0.79
HLA-DPA1P20036 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.98■□□□□ 0.79
HLA-DPA1P20036 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.98■□□□□ 0.79
HLA-DPA1P20036 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HLA-DPA1P20036 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HLA-DPA1P20036 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HLA-DPA1P20036 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HLA-DPA1P20036 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.98■□□□□ 0.79
HLA-DPA1P20036 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HLA-DPA1P20036 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HLA-DPA1P20036 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
HLA-DPA1P20036 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
HLA-DPA1P20036 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.97■□□□□ 0.79
HLA-DPA1P20036 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HLA-DPA1P20036 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
HLA-DPA1P20036 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
HLA-DPA1P20036 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
HLA-DPA1P20036 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HLA-DPA1P20036 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.97■□□□□ 0.79
HLA-DPA1P20036 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.97■□□□□ 0.79
HLA-DPA1P20036 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
HLA-DPA1P20036 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.97■□□□□ 0.79
HLA-DPA1P20036 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.97■□□□□ 0.79
HLA-DPA1P20036 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.97■□□□□ 0.79
HLA-DPA1P20036 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.97■□□□□ 0.79
HLA-DPA1P20036 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
HLA-DPA1P20036 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.97■□□□□ 0.79
HLA-DPA1P20036 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HLA-DPA1P20036 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.97■□□□□ 0.79
HLA-DPA1P20036 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.97■□□□□ 0.79
HLA-DPA1P20036 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HLA-DPA1P20036 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HLA-DPA1P20036 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
HLA-DPA1P20036 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
HLA-DPA1P20036 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
HLA-DPA1P20036 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
HLA-DPA1P20036 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.96■□□□□ 0.79
HLA-DPA1P20036 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HLA-DPA1P20036 AC116351.2-201ENST00000606540 1585 ntBASIC19.96■□□□□ 0.79
HLA-DPA1P20036 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HLA-DPA1P20036 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.96■□□□□ 0.79
HLA-DPA1P20036 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.96■□□□□ 0.79
HLA-DPA1P20036 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HLA-DPA1P20036 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HLA-DPA1P20036 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
HLA-DPA1P20036 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.96■□□□□ 0.79
HLA-DPA1P20036 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.96■□□□□ 0.79
HLA-DPA1P20036 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.96■□□□□ 0.79
HLA-DPA1P20036 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.96■□□□□ 0.79
HLA-DPA1P20036 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.96■□□□□ 0.79
HLA-DPA1P20036 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.96■□□□□ 0.79
HLA-DPA1P20036 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
HLA-DPA1P20036 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HLA-DPA1P20036 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
HLA-DPA1P20036 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HLA-DPA1P20036 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.96■□□□□ 0.79
HLA-DPA1P20036 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-DPA1P20036 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-DPA1P20036 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-DPA1P20036 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-DPA1P20036 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-DPA1P20036 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.95■□□□□ 0.78
HLA-DPA1P20036 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
HLA-DPA1P20036 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.95■□□□□ 0.78
HLA-DPA1P20036 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-DPA1P20036 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.95■□□□□ 0.78
HLA-DPA1P20036 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.95■□□□□ 0.78
HLA-DPA1P20036 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.95■□□□□ 0.78
HLA-DPA1P20036 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.95■□□□□ 0.78
HLA-DPA1P20036 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.95■□□□□ 0.78
HLA-DPA1P20036 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-DPA1P20036 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
HLA-DPA1P20036 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.95■□□□□ 0.78
HLA-DPA1P20036 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-DPA1P20036 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-DPA1P20036 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms