Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATF4P18848 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ATF4P18848 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ATF4P18848 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
ATF4P18848 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.51■□□□□ 0.23
ATF4P18848 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATF4P18848 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
ATF4P18848 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
ATF4P18848 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATF4P18848 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATF4P18848 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATF4P18848 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ATF4P18848 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC16.51■□□□□ 0.23
ATF4P18848 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATF4P18848 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATF4P18848 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATF4P18848 MIR935-201ENST00000401179 91 ntBASIC16.51■□□□□ 0.23
ATF4P18848 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATF4P18848 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC16.51■□□□□ 0.23
ATF4P18848 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC16.51■□□□□ 0.23
ATF4P18848 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC16.51■□□□□ 0.23
ATF4P18848 AC106739.1-201ENST00000617035 715 ntBASIC16.51■□□□□ 0.23
ATF4P18848 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC16.51■□□□□ 0.23
ATF4P18848 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.51■□□□□ 0.23
ATF4P18848 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATF4P18848 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
ATF4P18848 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
ATF4P18848 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATF4P18848 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
ATF4P18848 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATF4P18848 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.51■□□□□ 0.23
ATF4P18848 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.51■□□□□ 0.23
ATF4P18848 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATF4P18848 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATF4P18848 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ATF4P18848 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ATF4P18848 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
ATF4P18848 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
ATF4P18848 AC046158.3-201ENST00000624947 2558 ntBASIC16.5■□□□□ 0.23
ATF4P18848 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATF4P18848 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
ATF4P18848 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
ATF4P18848 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATF4P18848 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC16.5■□□□□ 0.23
ATF4P18848 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.5■□□□□ 0.23
ATF4P18848 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ATF4P18848 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATF4P18848 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC16.5■□□□□ 0.23
ATF4P18848 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATF4P18848 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATF4P18848 SRD5A1P1-201ENST00000442297 786 ntBASIC16.5■□□□□ 0.23
ATF4P18848 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATF4P18848 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC16.5■□□□□ 0.23
ATF4P18848 DUX4L19-201ENST00000557448 1267 ntBASIC16.5■□□□□ 0.23
ATF4P18848 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC16.5■□□□□ 0.23
ATF4P18848 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATF4P18848 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATF4P18848 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATF4P18848 AC009053.2-201ENST00000563701 2365 ntBASIC16.5■□□□□ 0.23
ATF4P18848 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ATF4P18848 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ATF4P18848 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATF4P18848 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATF4P18848 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ATF4P18848 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATF4P18848 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
ATF4P18848 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.49■□□□□ 0.23
ATF4P18848 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
ATF4P18848 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATF4P18848 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATF4P18848 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATF4P18848 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC16.49■□□□□ 0.23
ATF4P18848 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATF4P18848 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATF4P18848 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATF4P18848 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC16.49■□□□□ 0.23
ATF4P18848 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC16.49■□□□□ 0.23
ATF4P18848 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATF4P18848 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC16.49■□□□□ 0.23
ATF4P18848 AC092171.4-201ENST00000609130 632 ntBASIC16.49■□□□□ 0.23
ATF4P18848 AC087239.1-201ENST00000622671 572 ntBASIC16.49■□□□□ 0.23
ATF4P18848 RASSF1-AS1-201ENST00000629828 790 ntBASIC16.49■□□□□ 0.23
ATF4P18848 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
ATF4P18848 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
ATF4P18848 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
ATF4P18848 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATF4P18848 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATF4P18848 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
ATF4P18848 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATF4P18848 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ATF4P18848 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATF4P18848 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATF4P18848 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
ATF4P18848 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATF4P18848 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.48■□□□□ 0.23
ATF4P18848 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATF4P18848 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATF4P18848 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATF4P18848 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATF4P18848 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms