Protein–RNA interactions for Protein: P16112

ACAN, Aggrecan core protein, humanhuman

Predictions only

Length 2,415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACANP16112 AL136038.3-201ENST00000561909 1096 ntBASIC16.31■□□□□ 0.2
ACANP16112 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.31■□□□□ 0.2
ACANP16112 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.31■□□□□ 0.2
ACANP16112 MIR3652-201ENST00000579335 131 ntBASIC16.31■□□□□ 0.2
ACANP16112 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.31■□□□□ 0.2
ACANP16112 DYM-203ENST00000442713 2147 ntTSL 2 BASIC16.31■□□□□ 0.2
ACANP16112 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
ACANP16112 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
ACANP16112 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ACANP16112 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ACANP16112 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.31■□□□□ 0.2
ACANP16112 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ACANP16112 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.31■□□□□ 0.2
ACANP16112 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC16.31■□□□□ 0.2
ACANP16112 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC16.31■□□□□ 0.2
ACANP16112 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ACANP16112 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ACANP16112 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ACANP16112 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.31■□□□□ 0.2
ACANP16112 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ACANP16112 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ACANP16112 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ACANP16112 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ACANP16112 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.3■□□□□ 0.2
ACANP16112 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.3■□□□□ 0.2
ACANP16112 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
ACANP16112 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ACANP16112 AC010653.2-201ENST00000623505 997 ntBASIC16.3■□□□□ 0.2
ACANP16112 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ACANP16112 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ACANP16112 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ACANP16112 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ACANP16112 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ACANP16112 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
ACANP16112 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ACANP16112 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC16.3■□□□□ 0.2
ACANP16112 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.3■□□□□ 0.2
ACANP16112 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ACANP16112 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.3■□□□□ 0.2
ACANP16112 PRSS44-201ENST00000515154 1146 ntBASIC16.3■□□□□ 0.2
ACANP16112 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ACANP16112 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
ACANP16112 AC140113.3-201ENST00000605663 199 ntBASIC16.3■□□□□ 0.2
ACANP16112 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
ACANP16112 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
ACANP16112 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC16.3■□□□□ 0.2
ACANP16112 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
ACANP16112 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ACANP16112 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ACANP16112 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ACANP16112 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ACANP16112 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.29■□□□□ 0.2
ACANP16112 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.29■□□□□ 0.2
ACANP16112 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
ACANP16112 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.29■□□□□ 0.2
ACANP16112 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.29■□□□□ 0.2
ACANP16112 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ACANP16112 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ACANP16112 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ACANP16112 CASK-201ENST00000378154 2494 ntTSL 5 BASIC16.29■□□□□ 0.2
ACANP16112 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ACANP16112 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ACANP16112 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.29■□□□□ 0.2
ACANP16112 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ACANP16112 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ACANP16112 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ACANP16112 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
ACANP16112 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.29■□□□□ 0.2
ACANP16112 MFAP1P1-201ENST00000442257 1255 ntBASIC16.29■□□□□ 0.2
ACANP16112 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
ACANP16112 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.29■□□□□ 0.2
ACANP16112 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
ACANP16112 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ACANP16112 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ACANP16112 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
ACANP16112 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
ACANP16112 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.28■□□□□ 0.2
ACANP16112 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ACANP16112 NPAP1P7-201ENST00000613027 823 ntBASIC16.28■□□□□ 0.2
ACANP16112 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ACANP16112 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.28■□□□□ 0.2
ACANP16112 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.28■□□□□ 0.2
ACANP16112 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
ACANP16112 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.28■□□□□ 0.2
ACANP16112 AC004951.3-201ENST00000418645 1148 ntBASIC16.28■□□□□ 0.2
ACANP16112 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.28■□□□□ 0.2
ACANP16112 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.28■□□□□ 0.2
ACANP16112 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ACANP16112 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ACANP16112 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ACANP16112 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ACANP16112 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ACANP16112 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ACANP16112 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
ACANP16112 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ACANP16112 AL022342.1-201ENST00000400363 863 ntBASIC16.27■□□□□ 0.2
ACANP16112 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ACANP16112 SLC25A1P2-201ENST00000430693 912 ntBASIC16.27■□□□□ 0.2
ACANP16112 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.27■□□□□ 0.2
ACANP16112 IFNL4P1-201ENST00000607083 540 ntBASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms