Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCL4P13236 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCL4P13236 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.75■□□□□ 0.59
CCL4P13236 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCL4P13236 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCL4P13236 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CCL4P13236 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.75■□□□□ 0.59
CCL4P13236 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCL4P13236 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCL4P13236 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CCL4P13236 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.75■□□□□ 0.59
CCL4P13236 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCL4P13236 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCL4P13236 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CCL4P13236 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCL4P13236 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.75■□□□□ 0.59
CCL4P13236 SLC25A3P1-201ENST00000443844 931 ntBASIC18.75■□□□□ 0.59
CCL4P13236 YBX1P10-201ENST00000444752 975 ntBASIC18.75■□□□□ 0.59
CCL4P13236 AC011506.1-201ENST00000474329 610 ntBASIC18.75■□□□□ 0.59
CCL4P13236 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.75■□□□□ 0.59
CCL4P13236 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.75■□□□□ 0.59
CCL4P13236 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCL4P13236 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCL4P13236 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.75■□□□□ 0.59
CCL4P13236 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
CCL4P13236 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.75■□□□□ 0.59
CCL4P13236 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.75■□□□□ 0.59
CCL4P13236 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCL4P13236 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCL4P13236 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.74■□□□□ 0.59
CCL4P13236 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCL4P13236 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCL4P13236 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCL4P13236 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.74■□□□□ 0.59
CCL4P13236 TUBB8P6-201ENST00000436895 1288 ntBASIC18.74■□□□□ 0.59
CCL4P13236 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.74■□□□□ 0.59
CCL4P13236 KRT18P16-201ENST00000510337 1294 ntBASIC18.74■□□□□ 0.59
CCL4P13236 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.74■□□□□ 0.59
CCL4P13236 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.74■□□□□ 0.59
CCL4P13236 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.74■□□□□ 0.59
CCL4P13236 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.74■□□□□ 0.59
CCL4P13236 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.74■□□□□ 0.59
CCL4P13236 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.74■□□□□ 0.59
CCL4P13236 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.74■□□□□ 0.59
CCL4P13236 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCL4P13236 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCL4P13236 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCL4P13236 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.74■□□□□ 0.59
CCL4P13236 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.74■□□□□ 0.59
CCL4P13236 AC073508.3-201ENST00000619697 1419 ntBASIC18.74■□□□□ 0.59
CCL4P13236 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCL4P13236 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCL4P13236 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCL4P13236 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.73■□□□□ 0.59
CCL4P13236 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.73■□□□□ 0.59
CCL4P13236 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.73■□□□□ 0.59
CCL4P13236 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.73■□□□□ 0.59
CCL4P13236 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.73■□□□□ 0.59
CCL4P13236 B3GAT3P1-201ENST00000471720 806 ntBASIC18.73■□□□□ 0.59
CCL4P13236 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.73■□□□□ 0.59
CCL4P13236 AC026271.3-201ENST00000571884 352 ntBASIC18.73■□□□□ 0.59
CCL4P13236 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.73■□□□□ 0.59
CCL4P13236 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CCL4P13236 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CCL4P13236 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCL4P13236 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.73■□□□□ 0.59
CCL4P13236 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.73■□□□□ 0.59
CCL4P13236 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCL4P13236 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.72■□□□□ 0.59
CCL4P13236 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCL4P13236 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCL4P13236 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCL4P13236 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.72■□□□□ 0.59
CCL4P13236 AC004980.1-204ENST00000429707 299 ntBASIC18.72■□□□□ 0.59
CCL4P13236 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCL4P13236 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.72■□□□□ 0.59
CCL4P13236 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.72■□□□□ 0.59
CCL4P13236 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CCL4P13236 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCL4P13236 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CCL4P13236 SMG8-203ENST00000578922 2178 ntBASIC18.72■□□□□ 0.59
CCL4P13236 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CCL4P13236 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCL4P13236 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.72■□□□□ 0.59
CCL4P13236 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CCL4P13236 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCL4P13236 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCL4P13236 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCL4P13236 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCL4P13236 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCL4P13236 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.71■□□□□ 0.59
CCL4P13236 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCL4P13236 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCL4P13236 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.71■□□□□ 0.59
CCL4P13236 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCL4P13236 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.71■□□□□ 0.59
CCL4P13236 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.71■□□□□ 0.59
CCL4P13236 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.71■□□□□ 0.59
CCL4P13236 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CCL4P13236 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms