Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLTAP09496 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLTAP09496 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLTAP09496 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CLTAP09496 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CLTAP09496 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
CLTAP09496 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.63■■□□□ 1.05
CLTAP09496 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.63■■□□□ 1.05
CLTAP09496 AL158047.1-201ENST00000445918 881 ntBASIC21.63■■□□□ 1.05
CLTAP09496 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.63■■□□□ 1.05
CLTAP09496 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.63■■□□□ 1.05
CLTAP09496 RPPH1-201ENST00000516869 333 ntBASIC21.63■■□□□ 1.05
CLTAP09496 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.63■■□□□ 1.05
CLTAP09496 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLTAP09496 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC21.63■■□□□ 1.05
CLTAP09496 AL359736.2-201ENST00000621992 437 ntBASIC21.63■■□□□ 1.05
CLTAP09496 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLTAP09496 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLTAP09496 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLTAP09496 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CLTAP09496 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLTAP09496 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CLTAP09496 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.63■■□□□ 1.05
CLTAP09496 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.63■■□□□ 1.05
CLTAP09496 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLTAP09496 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.63■■□□□ 1.05
CLTAP09496 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLTAP09496 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.63■■□□□ 1.05
CLTAP09496 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLTAP09496 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CLTAP09496 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLTAP09496 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLTAP09496 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CLTAP09496 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.62■■□□□ 1.05
CLTAP09496 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
CLTAP09496 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
CLTAP09496 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLTAP09496 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.62■■□□□ 1.05
CLTAP09496 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.62■■□□□ 1.05
CLTAP09496 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.62■■□□□ 1.05
CLTAP09496 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.62■■□□□ 1.05
CLTAP09496 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21.62■■□□□ 1.05
CLTAP09496 AL121906.2-201ENST00000621597 723 ntBASIC21.62■■□□□ 1.05
CLTAP09496 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC21.62■■□□□ 1.05
CLTAP09496 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
CLTAP09496 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CLTAP09496 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CLTAP09496 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLTAP09496 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLTAP09496 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
CLTAP09496 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CLTAP09496 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLTAP09496 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.61■■□□□ 1.05
CLTAP09496 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLTAP09496 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLTAP09496 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLTAP09496 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
CLTAP09496 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
CLTAP09496 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CLTAP09496 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.61■■□□□ 1.05
CLTAP09496 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLTAP09496 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CLTAP09496 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLTAP09496 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CLTAP09496 AC007952.6-201ENST00000573168 2673 ntBASIC21.61■■□□□ 1.05
CLTAP09496 AC003957.1-201ENST00000625108 2673 ntBASIC21.61■■□□□ 1.05
CLTAP09496 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.61■■□□□ 1.05
CLTAP09496 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CLTAP09496 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLTAP09496 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CLTAP09496 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLTAP09496 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.61■■□□□ 1.05
CLTAP09496 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLTAP09496 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CLTAP09496 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
CLTAP09496 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLTAP09496 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLTAP09496 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CLTAP09496 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLTAP09496 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CLTAP09496 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.61■■□□□ 1.05
CLTAP09496 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLTAP09496 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CLTAP09496 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLTAP09496 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLTAP09496 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.6■■□□□ 1.05
CLTAP09496 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.6■■□□□ 1.05
CLTAP09496 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLTAP09496 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLTAP09496 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CLTAP09496 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLTAP09496 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CLTAP09496 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.6■■□□□ 1.05
CLTAP09496 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CLTAP09496 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.6■■□□□ 1.05
CLTAP09496 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.6■■□□□ 1.05
CLTAP09496 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLTAP09496 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC21.6■■□□□ 1.05
CLTAP09496 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.6■■□□□ 1.05
CLTAP09496 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms