Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RETP07949 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
RETP07949 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
RETP07949 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.99■□□□□ 0.79
RETP07949 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.99■□□□□ 0.79
RETP07949 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RETP07949 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.99■□□□□ 0.79
RETP07949 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.99■□□□□ 0.79
RETP07949 UPK3BP1-201ENST00000428678 509 ntBASIC19.99■□□□□ 0.79
RETP07949 LIN28AP1-201ENST00000429574 405 ntBASIC19.99■□□□□ 0.79
RETP07949 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.99■□□□□ 0.79
RETP07949 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.99■□□□□ 0.79
RETP07949 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.99■□□□□ 0.79
RETP07949 AC091076.1-201ENST00000610741 619 ntBASIC19.99■□□□□ 0.79
RETP07949 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
RETP07949 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
RETP07949 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RETP07949 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RETP07949 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.99■□□□□ 0.79
RETP07949 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
RETP07949 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RETP07949 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.99■□□□□ 0.79
RETP07949 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RETP07949 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RETP07949 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RETP07949 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RETP07949 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RETP07949 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.98■□□□□ 0.79
RETP07949 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RETP07949 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.98■□□□□ 0.79
RETP07949 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.98■□□□□ 0.79
RETP07949 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RETP07949 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
RETP07949 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RETP07949 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RETP07949 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
RETP07949 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
RETP07949 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RETP07949 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RETP07949 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RETP07949 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RETP07949 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
RETP07949 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.97■□□□□ 0.79
RETP07949 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RETP07949 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.97■□□□□ 0.79
RETP07949 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.97■□□□□ 0.79
RETP07949 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RETP07949 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.97■□□□□ 0.79
RETP07949 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
RETP07949 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
RETP07949 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RETP07949 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.97■□□□□ 0.79
RETP07949 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.97■□□□□ 0.79
RETP07949 ATP5G1P1-201ENST00000448724 379 ntBASIC19.97■□□□□ 0.79
RETP07949 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.97■□□□□ 0.79
RETP07949 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
RETP07949 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.97■□□□□ 0.79
RETP07949 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RETP07949 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.97■□□□□ 0.79
RETP07949 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.97■□□□□ 0.79
RETP07949 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RETP07949 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
RETP07949 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RETP07949 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RETP07949 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.96■□□□□ 0.79
RETP07949 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.96■□□□□ 0.79
RETP07949 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
RETP07949 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.96■□□□□ 0.79
RETP07949 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RETP07949 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RETP07949 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.96■□□□□ 0.79
RETP07949 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RETP07949 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RETP07949 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.96■□□□□ 0.79
RETP07949 TPM4P1-201ENST00000436100 807 ntBASIC19.96■□□□□ 0.79
RETP07949 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.96■□□□□ 0.79
RETP07949 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RETP07949 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RETP07949 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.96■□□□□ 0.79
RETP07949 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.96■□□□□ 0.79
RETP07949 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.96■□□□□ 0.79
RETP07949 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
RETP07949 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RETP07949 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RETP07949 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RETP07949 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RETP07949 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.96■□□□□ 0.79
RETP07949 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RETP07949 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
RETP07949 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RETP07949 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
RETP07949 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.95■□□□□ 0.78
RETP07949 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RETP07949 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RETP07949 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.95■□□□□ 0.78
RETP07949 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RETP07949 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RETP07949 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RETP07949 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RETP07949 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms