Protein–RNA interactions for Protein: P04433

IGKV3-11, Immunoglobulin kappa variable 3-11, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3-11P04433 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.33■□□□□ 0.52
IGKV3-11P04433 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
IGKV3-11P04433 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
IGKV3-11P04433 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
IGKV3-11P04433 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
IGKV3-11P04433 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IGKV3-11P04433 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IGKV3-11P04433 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
IGKV3-11P04433 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
IGKV3-11P04433 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
IGKV3-11P04433 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
IGKV3-11P04433 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IGKV3-11P04433 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.32■□□□□ 0.52
IGKV3-11P04433 KRASP1-201ENST00000407852 552 ntBASIC18.32■□□□□ 0.52
IGKV3-11P04433 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
IGKV3-11P04433 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
IGKV3-11P04433 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.32■□□□□ 0.52
IGKV3-11P04433 AC142381.4-202ENST00000563973 229 ntBASIC18.32■□□□□ 0.52
IGKV3-11P04433 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
IGKV3-11P04433 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.32■□□□□ 0.52
IGKV3-11P04433 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.32■□□□□ 0.52
IGKV3-11P04433 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IGKV3-11P04433 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.32■□□□□ 0.52
IGKV3-11P04433 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IGKV3-11P04433 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
IGKV3-11P04433 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IGKV3-11P04433 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
IGKV3-11P04433 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.32■□□□□ 0.52
IGKV3-11P04433 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
IGKV3-11P04433 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
IGKV3-11P04433 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
IGKV3-11P04433 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
IGKV3-11P04433 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
IGKV3-11P04433 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.31■□□□□ 0.52
IGKV3-11P04433 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.31■□□□□ 0.52
IGKV3-11P04433 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
IGKV3-11P04433 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.31■□□□□ 0.52
IGKV3-11P04433 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.31■□□□□ 0.52
IGKV3-11P04433 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
IGKV3-11P04433 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
IGKV3-11P04433 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.31■□□□□ 0.52
IGKV3-11P04433 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.31■□□□□ 0.52
IGKV3-11P04433 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.31■□□□□ 0.52
IGKV3-11P04433 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.31■□□□□ 0.52
IGKV3-11P04433 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.31■□□□□ 0.52
IGKV3-11P04433 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
IGKV3-11P04433 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.31■□□□□ 0.52
IGKV3-11P04433 AP006587.1-201ENST00000534129 1502 ntBASIC18.31■□□□□ 0.52
IGKV3-11P04433 NBPF21P-201ENST00000425093 1451 ntBASIC18.31■□□□□ 0.52
IGKV3-11P04433 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
IGKV3-11P04433 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
IGKV3-11P04433 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
IGKV3-11P04433 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
IGKV3-11P04433 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.31■□□□□ 0.52
IGKV3-11P04433 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
IGKV3-11P04433 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.31■□□□□ 0.52
IGKV3-11P04433 TMEM179-206ENST00000616017 1645 ntBASIC18.31■□□□□ 0.52
IGKV3-11P04433 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.3■□□□□ 0.52
IGKV3-11P04433 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.3■□□□□ 0.52
IGKV3-11P04433 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.3■□□□□ 0.52
IGKV3-11P04433 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
IGKV3-11P04433 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.3■□□□□ 0.52
IGKV3-11P04433 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.3■□□□□ 0.52
IGKV3-11P04433 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.3■□□□□ 0.52
IGKV3-11P04433 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
IGKV3-11P04433 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
IGKV3-11P04433 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.3■□□□□ 0.52
IGKV3-11P04433 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
IGKV3-11P04433 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.3■□□□□ 0.52
IGKV3-11P04433 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
IGKV3-11P04433 AC110285.5-201ENST00000611501 352 ntBASIC18.3■□□□□ 0.52
IGKV3-11P04433 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
IGKV3-11P04433 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
IGKV3-11P04433 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
IGKV3-11P04433 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
IGKV3-11P04433 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
IGKV3-11P04433 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
IGKV3-11P04433 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.3■□□□□ 0.52
IGKV3-11P04433 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.3■□□□□ 0.52
IGKV3-11P04433 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
IGKV3-11P04433 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
IGKV3-11P04433 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
IGKV3-11P04433 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
IGKV3-11P04433 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
IGKV3-11P04433 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.29■□□□□ 0.52
IGKV3-11P04433 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
IGKV3-11P04433 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
IGKV3-11P04433 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
IGKV3-11P04433 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
IGKV3-11P04433 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
IGKV3-11P04433 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.29■□□□□ 0.52
IGKV3-11P04433 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
IGKV3-11P04433 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.29■□□□□ 0.52
IGKV3-11P04433 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
IGKV3-11P04433 AL158047.1-201ENST00000445918 881 ntBASIC18.29■□□□□ 0.52
IGKV3-11P04433 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.29■□□□□ 0.52
IGKV3-11P04433 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.29■□□□□ 0.52
IGKV3-11P04433 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.29■□□□□ 0.52
IGKV3-11P04433 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
IGKV3-11P04433 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms