Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDGFAP04085 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
PDGFAP04085 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDGFAP04085 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDGFAP04085 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDGFAP04085 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PDGFAP04085 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDGFAP04085 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
PDGFAP04085 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.5■□□□□ 0.55
PDGFAP04085 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PDGFAP04085 KRT16P5-201ENST00000455284 522 ntBASIC18.5■□□□□ 0.55
PDGFAP04085 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDGFAP04085 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.5■□□□□ 0.55
PDGFAP04085 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.5■□□□□ 0.55
PDGFAP04085 MIR6786-201ENST00000616843 113 ntBASIC18.5■□□□□ 0.55
PDGFAP04085 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDGFAP04085 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PDGFAP04085 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PDGFAP04085 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PDGFAP04085 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDGFAP04085 NBPF21P-201ENST00000425093 1451 ntBASIC18.5■□□□□ 0.55
PDGFAP04085 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PDGFAP04085 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDGFAP04085 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.5■□□□□ 0.55
PDGFAP04085 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDGFAP04085 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDGFAP04085 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDGFAP04085 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
PDGFAP04085 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDGFAP04085 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDGFAP04085 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.49■□□□□ 0.55
PDGFAP04085 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.49■□□□□ 0.55
PDGFAP04085 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDGFAP04085 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDGFAP04085 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.49■□□□□ 0.55
PDGFAP04085 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.49■□□□□ 0.55
PDGFAP04085 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.49■□□□□ 0.55
PDGFAP04085 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.49■□□□□ 0.55
PDGFAP04085 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDGFAP04085 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PDGFAP04085 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PDGFAP04085 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PDGFAP04085 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.49■□□□□ 0.55
PDGFAP04085 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PDGFAP04085 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDGFAP04085 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
PDGFAP04085 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDGFAP04085 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PDGFAP04085 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.49■□□□□ 0.55
PDGFAP04085 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDGFAP04085 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.49■□□□□ 0.55
PDGFAP04085 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDGFAP04085 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDGFAP04085 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.48■□□□□ 0.55
PDGFAP04085 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.48■□□□□ 0.55
PDGFAP04085 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PDGFAP04085 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDGFAP04085 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.48■□□□□ 0.55
PDGFAP04085 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDGFAP04085 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.48■□□□□ 0.55
PDGFAP04085 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDGFAP04085 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDGFAP04085 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.48■□□□□ 0.55
PDGFAP04085 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.48■□□□□ 0.55
PDGFAP04085 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
PDGFAP04085 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.48■□□□□ 0.55
PDGFAP04085 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.48■□□□□ 0.55
PDGFAP04085 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.48■□□□□ 0.55
PDGFAP04085 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDGFAP04085 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDGFAP04085 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
PDGFAP04085 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDGFAP04085 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDGFAP04085 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.48■□□□□ 0.55
PDGFAP04085 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
PDGFAP04085 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDGFAP04085 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDGFAP04085 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.47■□□□□ 0.55
PDGFAP04085 AC079598.2-202ENST00000546624 1451 ntBASIC18.47■□□□□ 0.55
PDGFAP04085 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
PDGFAP04085 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDGFAP04085 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDGFAP04085 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
PDGFAP04085 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDGFAP04085 ARMC10P1-201ENST00000313754 855 ntBASIC18.47■□□□□ 0.55
PDGFAP04085 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDGFAP04085 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PDGFAP04085 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
PDGFAP04085 RBM17P1-201ENST00000453646 1190 ntBASIC18.47■□□□□ 0.55
PDGFAP04085 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.47■□□□□ 0.55
PDGFAP04085 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.47■□□□□ 0.55
PDGFAP04085 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PDGFAP04085 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.47■□□□□ 0.55
PDGFAP04085 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.47■□□□□ 0.55
PDGFAP04085 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.47■□□□□ 0.55
PDGFAP04085 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.47■□□□□ 0.55
PDGFAP04085 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDGFAP04085 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.47■□□□□ 0.55
PDGFAP04085 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDGFAP04085 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms