Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
HLA-DQA1P01909 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
HLA-DQA1P01909 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
HLA-DQA1P01909 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC14.89□□□□□ -0.03
HLA-DQA1P01909 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC14.89□□□□□ -0.03
HLA-DQA1P01909 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DQA1P01909 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
HLA-DQA1P01909 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
HLA-DQA1P01909 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
HLA-DQA1P01909 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQA1P01909 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQA1P01909 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQA1P01909 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQA1P01909 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC14.88□□□□□ -0.03
HLA-DQA1P01909 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQA1P01909 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC14.88□□□□□ -0.03
HLA-DQA1P01909 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQA1P01909 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQA1P01909 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC14.88□□□□□ -0.03
HLA-DQA1P01909 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQA1P01909 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC14.88□□□□□ -0.03
HLA-DQA1P01909 pRNA.6-201ENST00000610482 90 ntBASIC14.88□□□□□ -0.03
HLA-DQA1P01909 pRNA.5-201ENST00000612139 90 ntBASIC14.88□□□□□ -0.03
HLA-DQA1P01909 pRNA.11-201ENST00000618423 90 ntBASIC14.88□□□□□ -0.03
HLA-DQA1P01909 pRNA.13-201ENST00000619112 90 ntBASIC14.88□□□□□ -0.03
HLA-DQA1P01909 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQA1P01909 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQA1P01909 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC14.88□□□□□ -0.03
HLA-DQA1P01909 AC009113.1-201ENST00000570267 2443 ntBASIC14.88□□□□□ -0.03
HLA-DQA1P01909 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQA1P01909 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQA1P01909 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQA1P01909 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
HLA-DQA1P01909 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQA1P01909 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC14.88□□□□□ -0.03
HLA-DQA1P01909 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQA1P01909 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQA1P01909 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC14.88□□□□□ -0.03
HLA-DQA1P01909 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQA1P01909 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
HLA-DQA1P01909 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQA1P01909 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQA1P01909 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
HLA-DQA1P01909 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
HLA-DQA1P01909 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQA1P01909 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQA1P01909 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQA1P01909 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
HLA-DQA1P01909 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC14.87□□□□□ -0.03
HLA-DQA1P01909 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQA1P01909 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQA1P01909 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQA1P01909 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQA1P01909 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
HLA-DQA1P01909 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC14.87□□□□□ -0.03
HLA-DQA1P01909 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
HLA-DQA1P01909 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQA1P01909 SRD5A1P1-201ENST00000442297 786 ntBASIC14.87□□□□□ -0.03
HLA-DQA1P01909 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQA1P01909 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC14.87□□□□□ -0.03
HLA-DQA1P01909 MIR3621-201ENST00000580529 85 ntBASIC14.87□□□□□ -0.03
HLA-DQA1P01909 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQA1P01909 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
HLA-DQA1P01909 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQA1P01909 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC14.87□□□□□ -0.03
HLA-DQA1P01909 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQA1P01909 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQA1P01909 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DQA1P01909 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC14.86□□□□□ -0.03
HLA-DQA1P01909 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
HLA-DQA1P01909 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC14.86□□□□□ -0.03
HLA-DQA1P01909 BX119927.1-201ENST00000636596 1552 ntBASIC14.86□□□□□ -0.03
HLA-DQA1P01909 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DQA1P01909 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC14.86□□□□□ -0.03
HLA-DQA1P01909 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC14.86□□□□□ -0.03
HLA-DQA1P01909 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
HLA-DQA1P01909 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DQA1P01909 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DQA1P01909 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC14.86□□□□□ -0.03
HLA-DQA1P01909 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DQA1P01909 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DQA1P01909 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
HLA-DQA1P01909 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DQA1P01909 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DQA1P01909 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC14.86□□□□□ -0.03
HLA-DQA1P01909 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DQA1P01909 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DQA1P01909 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DQA1P01909 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC14.86□□□□□ -0.03
HLA-DQA1P01909 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DQA1P01909 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC14.86□□□□□ -0.03
HLA-DQA1P01909 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC14.86□□□□□ -0.03
HLA-DQA1P01909 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC14.86□□□□□ -0.03
HLA-DQA1P01909 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DQA1P01909 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC14.86□□□□□ -0.03
HLA-DQA1P01909 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC14.86□□□□□ -0.03
HLA-DQA1P01909 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DQA1P01909 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DQA1P01909 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
HLA-DQA1P01909 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms