Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC21.54■■□□□ 1.04
TIMP1P01033 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC21.54■■□□□ 1.04
TIMP1P01033 PP7080-204ENST00000510714 601 ntTSL 3 BASIC21.54■■□□□ 1.04
TIMP1P01033 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TIMP1P01033 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC21.54■■□□□ 1.04
TIMP1P01033 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC21.54■■□□□ 1.04
TIMP1P01033 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.54■■□□□ 1.04
TIMP1P01033 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
TIMP1P01033 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TIMP1P01033 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
TIMP1P01033 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TIMP1P01033 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.54■■□□□ 1.04
TIMP1P01033 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
TIMP1P01033 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.54■■□□□ 1.04
TIMP1P01033 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TIMP1P01033 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TIMP1P01033 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC21.53■■□□□ 1.04
TIMP1P01033 AC018553.1-201ENST00000616682 1458 ntBASIC21.53■■□□□ 1.04
TIMP1P01033 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TIMP1P01033 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.53■■□□□ 1.04
TIMP1P01033 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
TIMP1P01033 ANKRD20A18P-201ENST00000359341 492 ntBASIC21.53■■□□□ 1.04
TIMP1P01033 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TIMP1P01033 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TIMP1P01033 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TIMP1P01033 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TIMP1P01033 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC21.53■■□□□ 1.04
TIMP1P01033 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC21.53■■□□□ 1.04
TIMP1P01033 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC21.53■■□□□ 1.04
TIMP1P01033 AL023803.3-201ENST00000615559 522 ntBASIC21.53■■□□□ 1.04
TIMP1P01033 HLA-A-209ENST00000638375 975 ntBASIC21.53■■□□□ 1.04
TIMP1P01033 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.53■■□□□ 1.04
TIMP1P01033 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TIMP1P01033 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.53■■□□□ 1.04
TIMP1P01033 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.53■■□□□ 1.04
TIMP1P01033 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
TIMP1P01033 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
TIMP1P01033 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TIMP1P01033 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.52■■□□□ 1.04
TIMP1P01033 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TIMP1P01033 BET1L-202ENST00000332865 533 ntTSL 5 BASIC21.52■■□□□ 1.04
TIMP1P01033 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC21.52■■□□□ 1.04
TIMP1P01033 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.52■■□□□ 1.04
TIMP1P01033 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC21.52■■□□□ 1.04
TIMP1P01033 TSPY17P-201ENST00000450329 467 ntBASIC21.52■■□□□ 1.04
TIMP1P01033 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC21.52■■□□□ 1.04
TIMP1P01033 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.52■■□□□ 1.04
TIMP1P01033 AL512604.3-201ENST00000569583 964 ntBASIC21.52■■□□□ 1.04
TIMP1P01033 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TIMP1P01033 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.52■■□□□ 1.04
TIMP1P01033 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC21.52■■□□□ 1.04
TIMP1P01033 VPS72-207ENST00000640458 689 ntTSL 5 BASIC21.52■■□□□ 1.04
TIMP1P01033 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TIMP1P01033 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TIMP1P01033 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
TIMP1P01033 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.04
TIMP1P01033 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
TIMP1P01033 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
TIMP1P01033 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.03
TIMP1P01033 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
TIMP1P01033 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TIMP1P01033 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TIMP1P01033 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.51■■□□□ 1.03
TIMP1P01033 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TIMP1P01033 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC21.51■■□□□ 1.03
TIMP1P01033 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC21.51■■□□□ 1.03
TIMP1P01033 AL671277.2-201ENST00000458060 996 ntBASIC21.51■■□□□ 1.03
TIMP1P01033 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC21.51■■□□□ 1.03
TIMP1P01033 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TIMP1P01033 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TIMP1P01033 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TIMP1P01033 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TIMP1P01033 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.51■■□□□ 1.03
TIMP1P01033 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TIMP1P01033 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.51■■□□□ 1.03
TIMP1P01033 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
TIMP1P01033 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.51■■□□□ 1.03
TIMP1P01033 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TIMP1P01033 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.5■■□□□ 1.03
TIMP1P01033 AL121603.2-201ENST00000557373 2117 ntBASIC21.5■■□□□ 1.03
TIMP1P01033 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TIMP1P01033 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TIMP1P01033 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TIMP1P01033 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TIMP1P01033 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TIMP1P01033 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TIMP1P01033 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TIMP1P01033 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TIMP1P01033 HCG4P8-203ENST00000443049 980 ntBASIC21.5■■□□□ 1.03
TIMP1P01033 GXYLT1P6-201ENST00000456472 1187 ntBASIC21.5■■□□□ 1.03
TIMP1P01033 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21.5■■□□□ 1.03
TIMP1P01033 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TIMP1P01033 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC21.5■■□□□ 1.03
TIMP1P01033 AC116407.4-201ENST00000623319 1061 ntBASIC21.5■■□□□ 1.03
TIMP1P01033 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC21.5■■□□□ 1.03
TIMP1P01033 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC21.5■■□□□ 1.03
TIMP1P01033 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TIMP1P01033 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
TIMP1P01033 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.49■■□□□ 1.03
TIMP1P01033 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms