Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.28■□□□□ 0.84
MT-CO1P00395 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
MT-CO1P00395 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
MT-CO1P00395 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.28■□□□□ 0.84
MT-CO1P00395 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.28■□□□□ 0.84
MT-CO1P00395 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.28■□□□□ 0.84
MT-CO1P00395 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
MT-CO1P00395 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
MT-CO1P00395 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.28■□□□□ 0.84
MT-CO1P00395 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
MT-CO1P00395 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.28■□□□□ 0.84
MT-CO1P00395 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
MT-CO1P00395 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.28■□□□□ 0.84
MT-CO1P00395 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.28■□□□□ 0.84
MT-CO1P00395 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
MT-CO1P00395 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
MT-CO1P00395 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MT-CO1P00395 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
MT-CO1P00395 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.27■□□□□ 0.84
MT-CO1P00395 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.27■□□□□ 0.84
MT-CO1P00395 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
MT-CO1P00395 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.27■□□□□ 0.84
MT-CO1P00395 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
MT-CO1P00395 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
MT-CO1P00395 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MT-CO1P00395 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.27■□□□□ 0.84
MT-CO1P00395 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MT-CO1P00395 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MT-CO1P00395 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
MT-CO1P00395 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.27■□□□□ 0.84
MT-CO1P00395 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
MT-CO1P00395 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
MT-CO1P00395 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
MT-CO1P00395 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
MT-CO1P00395 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.27■□□□□ 0.84
MT-CO1P00395 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.27■□□□□ 0.84
MT-CO1P00395 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.27■□□□□ 0.84
MT-CO1P00395 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
MT-CO1P00395 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
MT-CO1P00395 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.27■□□□□ 0.84
MT-CO1P00395 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.27■□□□□ 0.84
MT-CO1P00395 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
MT-CO1P00395 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
MT-CO1P00395 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.27■□□□□ 0.83
MT-CO1P00395 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.83
MT-CO1P00395 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.83
MT-CO1P00395 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
MT-CO1P00395 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MT-CO1P00395 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MT-CO1P00395 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
MT-CO1P00395 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
MT-CO1P00395 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
MT-CO1P00395 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MT-CO1P00395 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MT-CO1P00395 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.26■□□□□ 0.83
MT-CO1P00395 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.26■□□□□ 0.83
MT-CO1P00395 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
MT-CO1P00395 AC124016.1-201ENST00000609552 612 ntBASIC20.26■□□□□ 0.83
MT-CO1P00395 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MT-CO1P00395 FAM197Y4-202ENST00000622692 608 ntBASIC20.26■□□□□ 0.83
MT-CO1P00395 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MT-CO1P00395 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
MT-CO1P00395 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MT-CO1P00395 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
MT-CO1P00395 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.26■□□□□ 0.83
MT-CO1P00395 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
MT-CO1P00395 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MT-CO1P00395 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.26■□□□□ 0.83
MT-CO1P00395 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
MT-CO1P00395 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.25■□□□□ 0.83
MT-CO1P00395 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
MT-CO1P00395 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MT-CO1P00395 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MT-CO1P00395 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
MT-CO1P00395 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
MT-CO1P00395 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
MT-CO1P00395 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
MT-CO1P00395 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MT-CO1P00395 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MT-CO1P00395 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MT-CO1P00395 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MT-CO1P00395 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.25■□□□□ 0.83
MT-CO1P00395 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
MT-CO1P00395 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.25■□□□□ 0.83
MT-CO1P00395 AC093827.2-201ENST00000512654 315 ntBASIC20.25■□□□□ 0.83
MT-CO1P00395 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.25■□□□□ 0.83
MT-CO1P00395 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.25■□□□□ 0.83
MT-CO1P00395 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.25■□□□□ 0.83
MT-CO1P00395 AL121829.2-201ENST00000620908 328 ntBASIC20.25■□□□□ 0.83
MT-CO1P00395 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
MT-CO1P00395 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
MT-CO1P00395 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
MT-CO1P00395 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MT-CO1P00395 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.25■□□□□ 0.83
MT-CO1P00395 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MT-CO1P00395 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.24■□□□□ 0.83
MT-CO1P00395 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MT-CO1P00395 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.24■□□□□ 0.83
MT-CO1P00395 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MT-CO1P00395 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms