Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
GPC4O75487 HLA-L-209ENST00000420110 1011 ntBASIC19.81■□□□□ 0.76
GPC4O75487 AL138781.1-201ENST00000566567 1274 ntBASIC19.81■□□□□ 0.76
GPC4O75487 MIR4758-201ENST00000577688 71 ntBASIC19.81■□□□□ 0.76
GPC4O75487 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
GPC4O75487 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.81■□□□□ 0.76
GPC4O75487 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.81■□□□□ 0.76
GPC4O75487 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.81■□□□□ 0.76
GPC4O75487 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.81■□□□□ 0.76
GPC4O75487 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.81■□□□□ 0.76
GPC4O75487 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
GPC4O75487 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.81■□□□□ 0.76
GPC4O75487 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
GPC4O75487 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
GPC4O75487 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
GPC4O75487 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GPC4O75487 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GPC4O75487 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
GPC4O75487 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
GPC4O75487 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GPC4O75487 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.8■□□□□ 0.76
GPC4O75487 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GPC4O75487 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
GPC4O75487 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.8■□□□□ 0.76
GPC4O75487 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GPC4O75487 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GPC4O75487 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.8■□□□□ 0.76
GPC4O75487 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.8■□□□□ 0.76
GPC4O75487 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
GPC4O75487 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
GPC4O75487 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.8■□□□□ 0.76
GPC4O75487 AC073210.2-201ENST00000430369 194 ntBASIC19.8■□□□□ 0.76
GPC4O75487 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.8■□□□□ 0.76
GPC4O75487 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.8■□□□□ 0.76
GPC4O75487 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
GPC4O75487 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.8■□□□□ 0.76
GPC4O75487 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
GPC4O75487 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
GPC4O75487 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GPC4O75487 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GPC4O75487 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
GPC4O75487 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.79■□□□□ 0.76
GPC4O75487 DPP3P2-201ENST00000416030 1696 ntBASIC19.79■□□□□ 0.76
GPC4O75487 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
GPC4O75487 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
GPC4O75487 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.79■□□□□ 0.76
GPC4O75487 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.79■□□□□ 0.76
GPC4O75487 AC091874.3-201ENST00000512672 1195 ntBASIC19.79■□□□□ 0.76
GPC4O75487 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.79■□□□□ 0.76
GPC4O75487 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.79■□□□□ 0.76
GPC4O75487 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GPC4O75487 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
GPC4O75487 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
GPC4O75487 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
GPC4O75487 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GPC4O75487 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.78■□□□□ 0.76
GPC4O75487 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.78■□□□□ 0.76
GPC4O75487 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
GPC4O75487 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
GPC4O75487 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
GPC4O75487 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.78■□□□□ 0.76
GPC4O75487 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.78■□□□□ 0.76
GPC4O75487 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
GPC4O75487 DUSP5P2-201ENST00000426873 1033 ntBASIC19.78■□□□□ 0.76
GPC4O75487 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
GPC4O75487 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.78■□□□□ 0.76
GPC4O75487 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
GPC4O75487 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GPC4O75487 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GPC4O75487 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
GPC4O75487 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.78■□□□□ 0.76
GPC4O75487 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GPC4O75487 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
GPC4O75487 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GPC4O75487 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
GPC4O75487 PTBP1P-201ENST00000554374 1601 ntBASIC19.77■□□□□ 0.76
GPC4O75487 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GPC4O75487 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
GPC4O75487 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
GPC4O75487 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
GPC4O75487 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
GPC4O75487 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
GPC4O75487 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.77■□□□□ 0.76
GPC4O75487 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
GPC4O75487 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.77■□□□□ 0.76
GPC4O75487 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
GPC4O75487 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.77■□□□□ 0.76
GPC4O75487 MYC-209ENST00000641252 345 ntBASIC19.77■□□□□ 0.76
GPC4O75487 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.77■□□□□ 0.76
GPC4O75487 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
GPC4O75487 SMG8-203ENST00000578922 2178 ntBASIC19.77■□□□□ 0.75
GPC4O75487 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
GPC4O75487 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GPC4O75487 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GPC4O75487 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.76■□□□□ 0.75
GPC4O75487 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.76■□□□□ 0.75
GPC4O75487 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.76■□□□□ 0.75
GPC4O75487 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GPC4O75487 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.76■□□□□ 0.75
GPC4O75487 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms