Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.6■□□□□ 0.73
KLHL41O60662 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
KLHL41O60662 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
KLHL41O60662 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KLHL41O60662 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
KLHL41O60662 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
KLHL41O60662 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
KLHL41O60662 TMEM179-206ENST00000616017 1645 ntBASIC19.59■□□□□ 0.73
KLHL41O60662 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
KLHL41O60662 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.59■□□□□ 0.73
KLHL41O60662 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.59■□□□□ 0.73
KLHL41O60662 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KLHL41O60662 AL512625.2-201ENST00000417533 625 ntBASIC19.59■□□□□ 0.73
KLHL41O60662 FAM201B-201ENST00000458407 597 ntBASIC19.59■□□□□ 0.73
KLHL41O60662 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
KLHL41O60662 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.59■□□□□ 0.73
KLHL41O60662 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.59■□□□□ 0.73
KLHL41O60662 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.59■□□□□ 0.73
KLHL41O60662 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KLHL41O60662 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
KLHL41O60662 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
KLHL41O60662 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KLHL41O60662 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
KLHL41O60662 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.59■□□□□ 0.73
KLHL41O60662 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
KLHL41O60662 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
KLHL41O60662 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.58■□□□□ 0.73
KLHL41O60662 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.73
KLHL41O60662 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.58■□□□□ 0.73
KLHL41O60662 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.58■□□□□ 0.73
KLHL41O60662 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
KLHL41O60662 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
KLHL41O60662 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
KLHL41O60662 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
KLHL41O60662 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.58■□□□□ 0.72
KLHL41O60662 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.58■□□□□ 0.72
KLHL41O60662 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.58■□□□□ 0.72
KLHL41O60662 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.58■□□□□ 0.72
KLHL41O60662 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.58■□□□□ 0.72
KLHL41O60662 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
KLHL41O60662 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.58■□□□□ 0.72
KLHL41O60662 AC093484.2-201ENST00000580996 2166 ntBASIC19.58■□□□□ 0.72
KLHL41O60662 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
KLHL41O60662 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
KLHL41O60662 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
KLHL41O60662 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
KLHL41O60662 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
KLHL41O60662 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
KLHL41O60662 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.58■□□□□ 0.72
KLHL41O60662 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
KLHL41O60662 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
KLHL41O60662 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
KLHL41O60662 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
KLHL41O60662 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
KLHL41O60662 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
KLHL41O60662 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.57■□□□□ 0.72
KLHL41O60662 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.57■□□□□ 0.72
KLHL41O60662 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.57■□□□□ 0.72
KLHL41O60662 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
KLHL41O60662 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
KLHL41O60662 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
KLHL41O60662 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
KLHL41O60662 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
KLHL41O60662 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
KLHL41O60662 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.57■□□□□ 0.72
KLHL41O60662 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.57■□□□□ 0.72
KLHL41O60662 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
KLHL41O60662 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.57■□□□□ 0.72
KLHL41O60662 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.57■□□□□ 0.72
KLHL41O60662 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.57■□□□□ 0.72
KLHL41O60662 AL162412.1-201ENST00000567129 965 ntBASIC19.57■□□□□ 0.72
KLHL41O60662 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.57■□□□□ 0.72
KLHL41O60662 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
KLHL41O60662 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
KLHL41O60662 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
KLHL41O60662 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
KLHL41O60662 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
KLHL41O60662 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.57■□□□□ 0.72
KLHL41O60662 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.57■□□□□ 0.72
KLHL41O60662 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.57■□□□□ 0.72
KLHL41O60662 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.57■□□□□ 0.72
KLHL41O60662 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
KLHL41O60662 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
KLHL41O60662 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
KLHL41O60662 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.56■□□□□ 0.72
KLHL41O60662 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
KLHL41O60662 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
KLHL41O60662 AC120498.9-201ENST00000339021 3867 ntBASIC19.56■□□□□ 0.72
KLHL41O60662 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
KLHL41O60662 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
KLHL41O60662 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.56■□□□□ 0.72
KLHL41O60662 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
KLHL41O60662 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
KLHL41O60662 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.56■□□□□ 0.72
KLHL41O60662 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.56■□□□□ 0.72
KLHL41O60662 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
KLHL41O60662 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
KLHL41O60662 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
KLHL41O60662 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
KLHL41O60662 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms